RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 FAM231CP0DMU5 169 aa1.74□□□□□ -2.13
RNU2-28P-201ENST00000410457 S100A7P31151 101 aa1.74□□□□□ -2.13
RNU2-28P-201ENST00000410457 CCR2P41597 374 aa1.74□□□□□ -2.13
RNU2-28P-201ENST00000410457 HINT1P49773 126 aaPredicted RBP1.74□□□□□ -2.13
RNU2-28P-201ENST00000410457 HES1Q14469 280 aa1.74□□□□□ -2.13
RNU2-28P-201ENST00000410457 GRK1Q15835 563 aa1.74□□□□□ -2.13
RNU2-28P-201ENST00000410457 GUK1Q16774 197 aa1.74□□□□□ -2.13
RNU2-28P-201ENST00000410457 Q6ZTI0 123 aa1.74□□□□□ -2.13
RNU2-28P-201ENST00000410457 OR4X2Q8NGF9 303 aa1.74□□□□□ -2.13
RNU2-28P-201ENST00000410457 ITFG2Q969R8 447 aa1.74□□□□□ -2.13
RNU2-28P-201ENST00000410457 TXNDC17Q9BRA2 123 aa1.74□□□□□ -2.13
RNU2-28P-201ENST00000410457 RBM7Q9Y580 266 aaKnown RBP1.74□□□□□ -2.13
RNU2-28P-201ENST00000410457 TRBV20OR9-2A0A075B6H5 130 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 IGLV3-9A0A075B6K5 115 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 A0A0G2JQZ4 141 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 TMEM114B3SHH9 223 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 H3BRN7 92 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 LEPROTO15243 131 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 KLRC4O43908 158 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 HAAOP46952 286 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 AP3S2P59780 193 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 TPI1P60174 286 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 STX5Q13190 355 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 SRSF6Q13247 344 aaKnown RBP1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 AKIRIN2Q53H80 203 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 DYNAPQ8N1N2 210 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 SLC7A6Q92536 515 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 DCUN1D1Q96GG9 259 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 PRAP1Q96NZ9 151 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 PPP1R2P1Q96PQ5 205 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 IMMP2LQ96T52 175 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 PAQR5Q9NXK6 330 aaPredicted RBP1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 MRPL27Q9P0M9 148 aaKnown RBP1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 TIMM9Q9Y5J7 89 aa1.73□□□□□ -2.13
RNU2-28P-201ENST00000410457 ZNF532Q9HCE3 1301 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 KDM5BQ9UGL1 1544 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 PTPRSQ13332 1948 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 TRAV7A0A075B6U4 112 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 A0A0J9YY10 115 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 A0A1B0GX78 115 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 ARRDC5A6NEK1 342 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 NOS1APO75052 506 aaPredicted RBP1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 HLA-DRB1P01911 266 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 TTRP02766 147 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 TFPTP0C1Z6 253 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 SNRPD2P62316 118 aaKnown RBP1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 MRPS15P82914 257 aaKnown RBP1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 ERHP84090 104 aaKnown RBP1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 EDDM3AQ14507 147 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 OR51T1Q8NGJ9 327 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 EFCAB1Q9HAE3 211 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 PRTFDC1Q9NRG1 225 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 CMTM6Q9NX76 183 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 FUT9Q9Y231 359 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 ITGB4P16144 1822 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 DOCK10Q96BY6 2186 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 NCKAP5O14513 1909 aa1.72□□□□□ -2.13
RNU2-28P-201ENST00000410457 FN1P02751 2386 aaKnown RBP1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 A0A087WUJ7 227 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 SMIM9A6NGZ8 99 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 LGALS1P09382 135 aaKnown RBP1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 HOXA6P31267 233 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 RPL28P46779 137 aaKnown RBP1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 RAB14P61106 215 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 ERVS71-1P61550 626 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 CCL20P78556 96 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 RELAQ04206 551 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 NUMA1Q14980 2115 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 TPRXLQ17RH7 258 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 ZNF791Q3KP31 576 aaPredicted RBP1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 ZNF705AQ6ZN79 300 aaPredicted RBP1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 Q6ZS49 121 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 RPP25LQ8N5L8 163 aaKnown RBP1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 MRPL30Q8TCC3 161 aaKnown RBP1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 KLK6Q92876 244 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 CHMP6Q96FZ7 201 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 WDR61Q9GZS3 305 aaKnown RBP1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 VCX3BQ9H321 246 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 CISHQ9NSE2 258 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 IL36BQ9NZH7 164 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 RTEL1-TNFRSF6BF6WH68 1400 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 ZFYVE9O95405 1425 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 WRNQ14191 1432 aaPredicted RBP eCLIP1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 RALGAPA2Q2PPJ7 1873 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 FLT4P35916 1363 aa1.71□□□□□ -2.14
RNU2-28P-201ENST00000410457 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 TMSB15BA0A087X1C1 80 aa1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 IGHV1-18A0A0C4DH31 117 aa1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 H3BT86 120 aa1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 H7C2G1 150 aa1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 J3QQQ9 107 aa1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 HAND1O96004 215 aa1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 PRM2P04554 102 aa1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 MSMBP08118 114 aa1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 MSNP26038 577 aaKnown RBP1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 PEBP1P30086 187 aaKnown RBP1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 RPL5P46777 297 aaKnown RBP1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 RPL26P61254 145 aaKnown RBP1.7□□□□□ -2.14
RNU2-28P-201ENST00000410457 HIST1H4AP62805 103 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms