RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 TMEM42Q69YG0 159 aa12.51□□□□□ -0.41
TTC7A-204ENST00000409825 TEX45Q8NA69 505 aa12.51□□□□□ -0.41
TTC7A-204ENST00000409825 PRORYQ9H606 182 aa12.51□□□□□ -0.41
TTC7A-204ENST00000409825 URGCP-MRPS24S4R325 110 aa12.51□□□□□ -0.41
TTC7A-204ENST00000409825 COL4A4P53420 1690 aaPredicted RBP12.51□□□□□ -0.41
TTC7A-204ENST00000409825 IGSF23A1L1A6 192 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 C7orf66A4D0T2 115 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 EFNB1P98172 346 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 A0A1W2PRX2 142 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 TMEM200BQ69YZ2 307 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 C19orf24Q9BVV8 132 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 J3KRW8 73 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 UCP1P25874 307 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 TMEM241Q24JQ0 296 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 SAMD13Q5VXD3 122 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 OR4B1Q8NGF8 309 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 NPIPB3Q92617 1050 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 EAF1Q96JC9 268 aaPredicted RBP12.5□□□□□ -0.41
TTC7A-204ENST00000409825 ELOA3CA0A087WX78 387 aaPredicted RBP12.5□□□□□ -0.41
TTC7A-204ENST00000409825 MSGN1A6NI15 193 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 SEC11BP0C7V7 166 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 TMEM177Q53S58 311 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 SMIM8Q96KF7 97 aa12.5□□□□□ -0.41
TTC7A-204ENST00000409825 J3QLI3 93 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 OR2C1O95371 312 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 NDUFA6P56556 154 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 TMEM187Q14656 261 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 CLEC9AQ6UXN8 241 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 C3orf56Q8N813 242 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 RNF5Q99942 180 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 DNAJC4Q9NNZ3 241 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 TNFSF18Q9UNG2 199 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 C17orf98A8MV24 154 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 H3BUX3 64 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 FAM157CP0CG43 387 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 PRTN3P24158 256 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 COL8A1P27658 744 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 ZP1P60852 638 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 SRSF12Q8WXF0 261 aaKnown RBP12.49□□□□□ -0.41
TTC7A-204ENST00000409825 C11orf94C9JXX5 98 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 SELLP14151 372 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 ZP3P21754 424 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 FGF8P55075 233 aaPredicted RBP12.49□□□□□ -0.41
TTC7A-204ENST00000409825 RANP62826 216 aaKnown RBP12.49□□□□□ -0.41
TTC7A-204ENST00000409825 GALNT14Q96FL9 552 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 PLSCR3Q9NRY6 295 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 MLNRO43193 412 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 IGLV1-44P01699 117 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 DLK1P80370 383 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 OR51G1Q8NGK1 321 aa12.49□□□□□ -0.41
TTC7A-204ENST00000409825 IL4P05112 153 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 PSG9Q00887 426 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 DHRS11Q6UWP2 260 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 MMP26Q9NRE1 261 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 LILRA1O75019 489 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 DEDDO75618 318 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 MPZP25189 248 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 DGAT2L7PQ6IED9 249 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 DPPA3Q6W0C5 159 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 IGKV1-12A0A0C4DH73 117 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 SIAH2O43255 324 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 IGKV1D-12P01611 117 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 ATP6V0CP27449 155 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 TPTE2P1Q5T6R2 138 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 ZNF429Q86V71 674 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 FER1L5A0AVI2 2057 aa12.48□□□□□ -0.41
TTC7A-204ENST00000409825 SHISA3A0PJX4 238 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 RNASEK-C17orf49H0YIS7 233 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 GATA4P43694 442 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 OR5AU1Q8NGC0 362 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 CLDND2Q8NHS1 167 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 G3V3Q6 166 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 BRD3OSQ6XYD6 125 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 C5orf17Q8NAS9 161 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 GAFA1Q96PS6 74 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 LYRM2Q9NU23 88 aaPredicted RBP12.47□□□□□ -0.41
TTC7A-204ENST00000409825 SAA1P0DJI8 122 aaPredicted RBP12.47□□□□□ -0.41
TTC7A-204ENST00000409825 GPR183P32249 361 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 UQCC3Q6UW78 93 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 GATAD1Q8WUU5 269 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 TMEM204Q9BSN7 226 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 PTPN13Q12923 2485 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 IGHV3-35A0A0C4DH35 117 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 PDE6DO43924 150 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 P01737 135 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 CXCL3P19876 107 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 PRB3Q04118 309 aaPredicted RBP12.47□□□□□ -0.41
TTC7A-204ENST00000409825 FABP9Q0Z7S8 132 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 CD177Q8N6Q3 437 aa12.47□□□□□ -0.41
TTC7A-204ENST00000409825 RNASEH2CQ8TDP1 164 aaKnown RBP12.47□□□□□ -0.41
TTC7A-204ENST00000409825 ANKHD1Q8IWZ3 2542 aaKnown RBP12.47□□□□□ -0.41
TTC7A-204ENST00000409825 A0A1W2PPQ1 181 aa12.46□□□□□ -0.41
TTC7A-204ENST00000409825 PSMB11A5LHX3 300 aa12.46□□□□□ -0.41
TTC7A-204ENST00000409825 OR9G9P0C7N8 305 aa12.46□□□□□ -0.41
TTC7A-204ENST00000409825 EGR1P18146 543 aa12.46□□□□□ -0.41
TTC7A-204ENST00000409825 RAB5AP20339 215 aa12.46□□□□□ -0.41
TTC7A-204ENST00000409825 SRSF7Q16629 238 aaKnown RBP eCLIP12.46□□□□□ -0.41
TTC7A-204ENST00000409825 CR1LQ2VPA4 569 aa12.46□□□□□ -0.41
TTC7A-204ENST00000409825 C12orf54Q6X4T0 127 aa12.46□□□□□ -0.41
TTC7A-204ENST00000409825 NECAP1Q8NC96 275 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms