RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 LSM3P62310 102 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 EXOSC2Q13868 293 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 MZT2AQ6P582 158 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 GPHB5Q86YW7 130 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 SGPP2Q8IWX5 399 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 C15orf40Q8WUR7 153 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 CXorf58Q96LI9 332 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 ZNF2Q9BSG1 426 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 FBXL7Q9UJT9 491 aa11.09□□□□□ -0.63
NIF3L1-205ENST00000409588 TRBV7-1A0A0A6YYK4 115 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 HMX3A6NHT5 357 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 UPK2O00526 184 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 CSN3P07498 182 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 PTHLHP12272 177 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 CTRB1P17538 263 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 TGFBR1P36897 503 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 RFX2P48378 723 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 MECP2P51608 486 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 ERVK-16P61578 105 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 AADACL3Q5VUY0 350 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 CTRB2Q6GPI1 263 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 LYSMD2Q8IV50 215 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 LAX1Q8IWV1 398 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 Q8N1Y9 231 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 DMBX1Q8NFW5 382 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 GPX8Q8TED1 209 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 AP3S1Q92572 193 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 COMMD3Q9UBI1 195 aa11.08□□□□□ -0.64
NIF3L1-205ENST00000409588 BMPR1BO00238 502 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 GPR31O00270 319 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 RBMXL2O75526 392 aaKnown RBP11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 PGLYRP1O75594 196 aaPredicted RBP11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 OR2J3O76001 311 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 PRH1P02810 166 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 FRMD6-AS1P0C7T7 363 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 TSPAN5P62079 268 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 FAM106AQ4KMX7 169 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 C10orf55Q5SWW7 151 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 SSX9Q7RTT3 188 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 GTSCR1Q86UQ5 136 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 TMEM17Q86X19 198 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 EEF1AKMT3Q96AZ1 226 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 DGCR14Q96DF8 476 aaKnown RBP11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 FANCD2OSQ96PS1 177 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 FKBP11Q9NYL4 201 aa11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 TECRQ9NZ01 308 aaKnown RBP11.07□□□□□ -0.64
NIF3L1-205ENST00000409588 MEIS3P1A6NDR6 274 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 E7EUB6 86 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 C3orf84H3BNL1 204 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 TRBV12-3P01733 135 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 PMP2P02689 132 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 UCP3P55916 312 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 OR2B8PP59922 312 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 SBSPONQ8IVN8 264 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 OR1L6Q8NGR2 347 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 OR51H1Q8NH63 302 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 GPHA2Q96T91 129 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 ATP6V0BQ99437 205 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 TSC22D3Q99576 134 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 ASCL2Q99929 193 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 QTRT1Q9BXR0 403 aaKnown RBP11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 C19orf73Q9NVV2 129 aa11.06□□□□□ -0.64
NIF3L1-205ENST00000409588 MARCH11A6NNE9 402 aa11.05□□□□□ -0.64
NIF3L1-205ENST00000409588 TRAPPC2P0DI81 140 aa11.05□□□□□ -0.64
NIF3L1-205ENST00000409588 TRAPPC2BP0DI82 140 aa11.05□□□□□ -0.64
NIF3L1-205ENST00000409588 IGHV4-30-4P0DP06 118 aa11.05□□□□□ -0.64
NIF3L1-205ENST00000409588 ZNF182P17025 639 aaPredicted RBP11.05□□□□□ -0.64
NIF3L1-205ENST00000409588 RCVRNP35243 200 aa11.05□□□□□ -0.64
NIF3L1-205ENST00000409588 VBP1P61758 197 aa11.05□□□□□ -0.64
NIF3L1-205ENST00000409588 NCS1P62166 190 aa11.05□□□□□ -0.64
NIF3L1-205ENST00000409588 OR1L8Q8NGR8 309 aa11.05□□□□□ -0.64
NIF3L1-205ENST00000409588 TMEM140Q9NV12 185 aa11.05□□□□□ -0.64
NIF3L1-205ENST00000409588 DMRT1Q9Y5R6 373 aa11.05□□□□□ -0.64
NIF3L1-205ENST00000409588 IGLV11-55A0A075B6I3 123 aa11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 A0A1B0GW64 132 aa11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 SNAPC5O75971 98 aa11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 EIF4EP06730 217 aaKnown RBP11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 FCER2P06734 321 aa11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 AREGP15514 252 aa11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 PTBP1P26599 531 aaKnown RBP eCLIP11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 HLA-DMAP28067 261 aa11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 HRH1P35367 487 aa11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 ARL3P36405 182 aa11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 VN1R17PQ8TDU5 208 aa11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 PALMDQ9NP74 551 aa11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 PRNDQ9UKY0 176 aa11.04□□□□□ -0.64
NIF3L1-205ENST00000409588 IGLC7A0M8Q6 106 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 S1PR2O95136 353 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 NDUFB8O95169 186 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 OR2C1O95371 312 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 RLN1P04808 185 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 CLEC3BP05452 202 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 SERPINE2P07093 398 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 ELK1P19419 428 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 TBPP20226 339 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 LPAR6P43657 344 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 DEFA5Q01523 94 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 DEFB114Q30KQ6 69 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 SLC38A6Q8IZM9 456 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms