RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 M0QYG6 137 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 CREBL2O60519 120 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 PGLYRP1O75594 196 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR2J3O76001 311 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 HRASP01112 189 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 IGHV3-23P01764 117 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 RLN1P04808 185 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 REG1AP05451 166 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 NAT1P18440 290 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 ALDH3B2P48448 385 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 RORCP51449 518 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 INSL3P51460 131 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 SYNJ2BPP57105 145 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 TAS2R46P59540 309 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 RPL8P62917 257 aaKnown RBP4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 ATP5G2Q06055 141 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 CATR1Q13166 79 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 EXOSC2Q13868 293 aaKnown RBP4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 KLF5Q13887 457 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 SPCS2Q15005 226 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 MSMO1Q15800 293 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 PHLDA2Q53GA4 152 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZNF343Q6P1L6 599 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 ACSM6Q6P461 480 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 DHRS11Q6UWP2 260 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 GPR141Q7Z602 305 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 TTC9CQ8N5M4 171 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZBTB34Q8NCN2 500 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 MOB3AQ96BX8 217 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 OR4C12Q96R67 309 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 B9D2Q9BPU9 175 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 RSRP1Q9BUV0 290 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 MRPS26Q9BYN8 205 aaKnown RBP4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 HRASLSQ9HDD0 168 aa4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 PEF1Q9UBV8 284 aaKnown RBP4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 ZMAT5Q9UDW3 170 aaKnown RBP4.41□□□□□ -1.7
HMGB1P20-201ENST00000402555 TRBV9A0A0B4J1U6 114 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 DPPA5A6NC42 116 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 NPIPB5A8MRT5 1133 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 PPP5D1E7EU14 171 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 BMPR1BO00238 502 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 UPK2O00526 184 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 CTDSP2O14595 271 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 RBFOX2O43251 390 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 NDUFB8O95169 186 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 BRI3O95415 125 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 HPRT1P00492 218 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 HLA-AP01891 365 aaKnown RBP4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZNF735P0CB33 412 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 NQO2P16083 231 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZNF182P17025 639 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 HLA-GP17693 338 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 EDN2P20800 178 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZP3P21754 424 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 RCVRNP35243 200 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 MAS1LP35410 378 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 LPAR6P43657 344 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR2B8PP59922 312 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 TSPAN5P62079 268 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 RPEL1Q2QD12 228 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 C15orf32Q32M92 178 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZNF585BQ52M93 769 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 MZT2AQ6P582 158 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 IL34Q6ZMJ4 242 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 CLVS1Q8IUQ0 354 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 DMBX1Q8NFW5 382 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR10W1Q8NGF6 305 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR6F1Q8NGZ6 308 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR52I2Q8NH67 350 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 VSTM2AQ8TAG5 236 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 FCAMRQ8WWV6 532 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 USMG5Q96IX5 58 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 CMTM3Q96MX0 182 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 ELOVL1Q9BW60 279 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 MIXL1Q9H2W2 232 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 SCPEP1Q9HB40 452 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 SLC2A9Q9NRM0 540 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 TMEM140Q9NV12 185 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 BET1LQ9NYM9 111 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 EXTL2Q9UBQ6 330 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 KLK11Q9UBX7 282 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 FBXL7Q9UJT9 491 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZNF257Q9Y2Q1 563 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 NSG2Q9Y328 171 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 SELENOKQ9Y6D0 94 aa4.4□□□□□ -1.71
HMGB1P20-201ENST00000402555 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 IGLC7A0M8Q6 106 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 IZUMO1RA6ND01 250 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 MFSD2BA6NFX1 497 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 FAM223BA6NKX1 122 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 MARCH11A6NNE9 402 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 GPR31O00270 319 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR2C1O95371 312 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 KRASP01116 189 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 IGLV1-51P01701 117 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 CD3DP04234 171 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 CSN3P07498 182 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 MED14OSP0DP75 135 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 GP9P14770 177 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms