RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 PYY3Q5JQD4 70 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 DNLZQ5SXM8 178 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 OR4F5Q8NH21 305 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 NEIL1Q96FI4 390 aaPredicted RBP13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 OR4F4Q96R69 305 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 QTRT1Q9BXR0 403 aaKnown RBP13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 PARLQ9H300 379 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 SRD5A3Q9H8P0 318 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 HRNRQ86YZ3 2850 aaPredicted RBP13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 DOPEY2Q9Y3R5 2298 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 B9A039 149 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 RBFOX2O43251 390 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 PFN1P07737 140 aaKnown RBP13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 SOD3P08294 240 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 EDDM3AQ14507 147 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 CR1LQ2VPA4 569 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 TGIF2LYQ8IUE0 185 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 MUC15Q8N387 334 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 OR5B12Q96R08 314 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 OR6C3Q9NZP0 311 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 WDR83OSQ9Y284 106 aa13.11□□□□□ -0.31
CHRFAM7A-203ENST00000401522 SRRM5B3KS81 715 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 H7BYZ3 331 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 MGST3O14880 152 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 YPEL1O60688 119 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 VENTXO95231 258 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 CFHR2P36980 270 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 CDC34P49427 236 aaPredicted RBP13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 SPCS3P61009 180 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 SPINK9Q5DT21 86 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 OR2Z1Q8NG97 314 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 OR10D4PQ8NGN7 298 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 OR52E5Q8NH55 327 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 SNX22Q96L94 193 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 YPEL2Q96QA6 119 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 DCTN5Q9BTE1 182 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 GNG12Q9UBI6 72 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 DCHS2Q6V1P9 2916 aa13.1□□□□□ -0.31
CHRFAM7A-203ENST00000401522 MPDU1O75352 247 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 OR9G9P0C7N8 305 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 CD1BP29016 333 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 RPS16P62249 146 aaKnown RBP13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 MORN2Q502X0 79 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 KIAA2026Q5HYC2 2103 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 ANAPC16Q96DE5 110 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 GPR61Q9BZJ8 451 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 PITPNC1Q9UKF7 332 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 IGKV1D-17A0A075B6S4 117 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 PAGE4O60829 102 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 FCGR3BO75015 233 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 EGR1P18146 543 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 KIR2DS2P43631 304 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 GALR1P47211 349 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 LINC00205P59089 165 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 ERVK-16P61578 105 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 PDLIM3Q53GG5 364 aaPredicted RBP13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 PRAMEF5Q5TYX0 476 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 GFI1BQ5VTD9 330 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 OR4A16Q8NH70 328 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 GATAD1Q8WUU5 269 aa13.09□□□□□ -0.31
CHRFAM7A-203ENST00000401522 F2RL2O00254 374 aa13.08□□□□□ -0.32
CHRFAM7A-203ENST00000401522 HRASP01112 189 aa13.08□□□□□ -0.32
CHRFAM7A-203ENST00000401522 GYPAP02724 150 aa13.08□□□□□ -0.32
CHRFAM7A-203ENST00000401522 LTC4SQ16873 150 aa13.08□□□□□ -0.32
CHRFAM7A-203ENST00000401522 Q8N7P7 452 aa13.08□□□□□ -0.32
CHRFAM7A-203ENST00000401522 OR51G1Q8NGK1 321 aa13.08□□□□□ -0.32
CHRFAM7A-203ENST00000401522 RAB1CQ92928 201 aa13.08□□□□□ -0.32
CHRFAM7A-203ENST00000401522 CHD3Q12873 2000 aaKnown RBP13.08□□□□□ -0.32
CHRFAM7A-203ENST00000401522 RAI1Q7Z5J4 1906 aaPredicted RBP13.08□□□□□ -0.32
CHRFAM7A-203ENST00000401522 TRAV20A0A0B4J274 112 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 C11orf94C9JXX5 98 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 M0R1X1 148 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 PDE6DO43924 150 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 PROP1O75360 226 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 DTX2Q86UW9 622 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 OR4X1Q8NH49 305 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 CBLN4Q9NTU7 201 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 ITGB1BP1O14713 200 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 LURAP1LQ8IV03 231 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 PFDN5Q99471 154 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 MS4A5Q9H3V2 200 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 NCOR1P1Q9H4R4 102 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 UBTD1Q9HAC8 227 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 RAB9BQ9NP90 201 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 GAB2Q9UQC2 676 aa13.07□□□□□ -0.32
CHRFAM7A-203ENST00000401522 CRYBG3Q68DQ2 2970 aa13.06□□□□□ -0.32
CHRFAM7A-203ENST00000401522 LRBAP50851 2863 aa13.06□□□□□ -0.32
CHRFAM7A-203ENST00000401522 PPP5D1E7EU14 171 aa13.06□□□□□ -0.32
CHRFAM7A-203ENST00000401522 IFNA10P01566 189 aa13.06□□□□□ -0.32
CHRFAM7A-203ENST00000401522 SRP14P37108 136 aaKnown RBP13.06□□□□□ -0.32
CHRFAM7A-203ENST00000401522 OPRK1P41145 380 aa13.06□□□□□ -0.32
CHRFAM7A-203ENST00000401522 VDAC2P45880 294 aaPredicted RBP13.06□□□□□ -0.32
CHRFAM7A-203ENST00000401522 FAM209BQ5JX69 171 aa13.06□□□□□ -0.32
CHRFAM7A-203ENST00000401522 C11orf71Q6IPW1 123 aa13.06□□□□□ -0.32
CHRFAM7A-203ENST00000401522 ZNF383Q8NA42 475 aa13.06□□□□□ -0.32
CHRFAM7A-203ENST00000401522 S1PR3Q99500 378 aa13.06□□□□□ -0.32
CHRFAM7A-203ENST00000401522 IFI27L2Q9H2X8 130 aa13.06□□□□□ -0.32
CHRFAM7A-203ENST00000401522 ZNF729A6NN14 1252 aaPredicted RBP13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 C17orf100A8MU93 164 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 F6UZH7 168 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms