RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 J3QRE1 110 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 OSR1Q8TAX0 266 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-204ENST00000400337 GATAD1Q8WUU5 269 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 SRSF12Q8WXF0 261 aaKnown RBP15.34■□□□□ 0.05
COL18A1-204ENST00000400337 RCC1LQ96I51 464 aaKnown RBP15.34■□□□□ 0.05
COL18A1-204ENST00000400337 TM4SF5O14894 197 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 PSG9Q00887 426 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 OR4A47Q6IF82 309 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 ELOVL1Q9BW60 279 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 FBXL15Q9H469 300 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 BTF3P20290 206 aaKnown RBP15.34■□□□□ 0.05
COL18A1-204ENST00000400337 PLPPR1Q8TBJ4 325 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 NPCDR1Q9BY65 106 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 ZFP30Q9Y2G7 519 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 IL6RP08887 468 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-204ENST00000400337 OR1P1Q8NH06 330 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 MRPL32Q9BYC8 188 aaKnown RBP15.34■□□□□ 0.05
COL18A1-204ENST00000400337 OR4C46A6NHA9 309 aa15.33■□□□□ 0.05
COL18A1-204ENST00000400337 NMUP48645 174 aa15.33■□□□□ 0.04
COL18A1-204ENST00000400337 ATP5IP56385 69 aaPredicted RBP15.33■□□□□ 0.04
COL18A1-204ENST00000400337 LCN2P80188 198 aa15.33■□□□□ 0.04
COL18A1-204ENST00000400337 LINC00305Q7Z4B0 112 aa15.33■□□□□ 0.04
COL18A1-204ENST00000400337 DPM3Q9P2X0 92 aa15.33■□□□□ 0.04
COL18A1-204ENST00000400337 ESPL1Q14674 2120 aa15.33■□□□□ 0.04
COL18A1-204ENST00000400337 GOLT1AQ6ZVE7 132 aa15.33■□□□□ 0.04
COL18A1-204ENST00000400337 CDC42EP3Q9UKI2 254 aa15.33■□□□□ 0.04
COL18A1-204ENST00000400337 IGHV3OR16-13A0A075B7E8 117 aa15.32■□□□□ 0.04
COL18A1-204ENST00000400337 IGHV3-74A0A0B4J1X5 117 aa15.32■□□□□ 0.04
COL18A1-204ENST00000400337 ARHGEF17Q96PE2 2063 aaPredicted RBP15.32■□□□□ 0.04
COL18A1-204ENST00000400337 IGKV3D-15A0A087WSY6 115 aa15.32■□□□□ 0.04
COL18A1-204ENST00000400337 IGKV3-15P01624 115 aa15.32■□□□□ 0.04
COL18A1-204ENST00000400337 C17orf100A8MU93 164 aa15.32■□□□□ 0.04
COL18A1-204ENST00000400337 EFNA2O43921 213 aa15.32■□□□□ 0.04
COL18A1-204ENST00000400337 IGHV3OR16-12A0A075B7B8 117 aa15.32■□□□□ 0.04
COL18A1-204ENST00000400337 NPPCP23582 126 aa15.32■□□□□ 0.04
COL18A1-204ENST00000400337 BTCP35070 178 aa15.32■□□□□ 0.04
COL18A1-204ENST00000400337 CYP2G1PQ6ZSU1 146 aa15.32■□□□□ 0.04
COL18A1-204ENST00000400337 OR10S1Q8NGN2 331 aa15.32■□□□□ 0.04
COL18A1-204ENST00000400337 SLC25A28Q96A46 364 aa15.32■□□□□ 0.04
COL18A1-204ENST00000400337 SSBP3Q9BWW4 388 aaPredicted RBP15.32■□□□□ 0.04
COL18A1-204ENST00000400337 CXorf65A6NEN9 183 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 KIAA1644Q3SXP7 199 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 S4R3C0 116 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 RIF1Q5UIP0 2472 aaKnown RBP15.31■□□□□ 0.04
COL18A1-204ENST00000400337 CD59P13987 128 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 CX3CL1P78423 397 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.31■□□□□ 0.04
COL18A1-204ENST00000400337 EEF1AKMT3Q96AZ1 226 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 NEU1Q99519 415 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 IFI27L2Q9H2X8 130 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 AKAP6Q13023 2319 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 AMY1AP04745 511 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 CCL1P22362 96 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 ANOS1P23352 680 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 TFF3Q07654 80 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 LAMTOR1Q6IAA8 161 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 FGFBP3Q8TAT2 258 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 SPRR3Q9UBC9 169 aa15.31■□□□□ 0.04
COL18A1-204ENST00000400337 PET117Q6UWS5 81 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 RALGAPA1Q6GYQ0 2036 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 HAX1O00165 279 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 GCGP01275 180 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 MRPL20Q9BYC9 149 aaKnown RBP15.3■□□□□ 0.04
COL18A1-204ENST00000400337 RNF222A6NCQ9 220 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 CRXO43186 299 aaPredicted RBP15.3■□□□□ 0.04
COL18A1-204ENST00000400337 IGHV3-23P01764 117 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 IGFBP2P18065 325 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 PHLDA3Q9Y5J5 127 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 ZNF502Q8TBZ5 544 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 SFRP2Q96HF1 295 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 TRBV6-7A0A0A0MS04 114 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 IGKV1D-13A0A0B4J2D9 117 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 IGKV1D-33P01593 117 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 IGKV1-33P01594 117 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 IGKV1-13P0DP09 117 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 CENPWQ5EE01 88 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 ZNF506Q5JVG8 444 aa15.3■□□□□ 0.04
COL18A1-204ENST00000400337 C17orf82Q86X59 251 aaPredicted RBP15.3■□□□□ 0.04
COL18A1-204ENST00000400337 TRAV14DV4A0A0A6YYC5 116 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 AREGP15514 252 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 CSRP1P21291 193 aaKnown RBP15.29■□□□□ 0.04
COL18A1-204ENST00000400337 C2orf83Q53S99 150 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 FAM90A1Q86YD7 464 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 FBLN5Q9UBX5 448 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 CACNA1DQ01668 2161 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 SRIP30626 198 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 RELQ04864 619 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-204ENST00000400337 SYT8Q8NBV8 401 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 DDB2Q92466 427 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 TMEM250H0YL14 139 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 M0R3E3 92 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 TFF1P04155 84 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 GAS1P54826 345 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 EFNB1P98172 346 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 MEF2CQ06413 473 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-204ENST00000400337 ZIC4Q8N9L1 334 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 NEU4Q8WWR8 484 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-204ENST00000400337 CCL3L1P16619 93 aa15.29■□□□□ 0.04
COL18A1-204ENST00000400337 ZNF385CQ66K41 422 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-204ENST00000400337 PAQR4Q8N4S7 273 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms