RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 LFNGQ8NES3 379 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 TMEM56Q96MV1 263 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 CITED2Q99967 270 aaPredicted RBP13.83□□□□□ -0.2
CTNS-203ENST00000399306 SLA2Q9H6Q3 261 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 PRNDQ9UKY0 176 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 TMEM56-RWDD3S4R434 201 aa13.83□□□□□ -0.2
CTNS-203ENST00000399306 WNK1Q9H4A3 2382 aa13.82□□□□□ -0.2
CTNS-203ENST00000399306 MSGN1A6NI15 193 aa13.82□□□□□ -0.2
CTNS-203ENST00000399306 SNAPC5O75971 98 aa13.82□□□□□ -0.2
CTNS-203ENST00000399306 OR5AC1P0C628 307 aa13.82□□□□□ -0.2
CTNS-203ENST00000399306 P0C879 139 aa13.82□□□□□ -0.2
CTNS-203ENST00000399306 G6PCP35575 357 aa13.82□□□□□ -0.2
CTNS-203ENST00000399306 CDX1P47902 265 aaPredicted RBP13.82□□□□□ -0.2
CTNS-203ENST00000399306 ECSCRQ19T08 205 aa13.82□□□□□ -0.2
CTNS-203ENST00000399306 TRIM16LQ309B1 348 aa13.82□□□□□ -0.2
CTNS-203ENST00000399306 C10orf99Q6UWK7 81 aa13.82□□□□□ -0.2
CTNS-203ENST00000399306 H2BFWTQ7Z2G1 175 aa13.82□□□□□ -0.2
CTNS-203ENST00000399306 HSD17B13Q7Z5P4 300 aaPredicted RBP13.82□□□□□ -0.2
CTNS-203ENST00000399306 CENPSQ8N2Z9 138 aa13.82□□□□□ -0.2
CTNS-203ENST00000399306 ADAD2Q8NCV1 583 aaKnown RBP13.82□□□□□ -0.2
CTNS-203ENST00000399306 OR5B3Q8NH48 314 aa13.82□□□□□ -0.2
CTNS-203ENST00000399306 RBPMSQ93062 196 aaKnown RBP13.82□□□□□ -0.2
CTNS-203ENST00000399306 A0A1W2PN81 502 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 ADARB2-AS1A8MUL3 147 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 CHRNA7P36544 502 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 CCR6P51684 374 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 RPL23AP62750 156 aaKnown RBP13.81□□□□□ -0.2
CTNS-203ENST00000399306 SUPT4H1P63272 117 aaKnown RBP13.81□□□□□ -0.2
CTNS-203ENST00000399306 ASAH1Q13510 395 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 TMEM187Q14656 261 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 PRR31Q5SQ13 230 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 ASPHD1Q5U4P2 390 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 TMEM65Q6PI78 240 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 TTC9CQ8N5M4 171 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 FAM110DQ8TAY7 271 aaPredicted RBP13.81□□□□□ -0.2
CTNS-203ENST00000399306 PHB2Q99623 299 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 FAM103A1Q9BTL3 118 aaKnown RBP13.81□□□□□ -0.2
CTNS-203ENST00000399306 COMMD5Q9GZQ3 224 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 TMEM14BQ9NUH8 114 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 ZNF257Q9Y2Q1 563 aa13.81□□□□□ -0.2
CTNS-203ENST00000399306 DUXBA0A1W2PPF3 345 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 C15orf61A6NNL5 157 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 TEX22C9J3V5 150 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 SOX15O60248 233 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 OR9G9P0C7N8 305 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 AKR1C4P17516 323 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 RAB9AP51151 201 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 OR2B8PP59922 312 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 KLK9Q2XQG4 91 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 SP6Q3SY56 376 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 MZT2BQ6NZ67 158 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 ZNF429Q86V71 674 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 C11orf44Q8N8P7 122 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 LRTM2Q8N967 370 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 OR4F17Q8NGA8 305 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 OR1L8Q8NGR8 309 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 LSM10Q969L4 123 aaKnown RBP13.8□□□□□ -0.2
CTNS-203ENST00000399306 RRNAD1Q96FB5 475 aaKnown RBP13.8□□□□□ -0.2
CTNS-203ENST00000399306 UBE2E2Q96LR5 201 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 OR4F4Q96R69 305 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 ALX4Q9H161 411 aaPredicted RBP13.8□□□□□ -0.2
CTNS-203ENST00000399306 CACFD1Q9UGQ2 172 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 KLK9Q9UKQ9 250 aa13.8□□□□□ -0.2
CTNS-203ENST00000399306 TRAV3A0A0B4J244 114 aa13.79□□□□□ -0.2
CTNS-203ENST00000399306 NPIPB5A8MRT5 1133 aa13.79□□□□□ -0.2
CTNS-203ENST00000399306 IGKV1-5P01602 117 aa13.79□□□□□ -0.2
CTNS-203ENST00000399306 CRYGCP07315 174 aa13.79□□□□□ -0.2
CTNS-203ENST00000399306 AKR1C2P52895 323 aa13.79□□□□□ -0.2
CTNS-203ENST00000399306 TMED4Q7Z7H5 227 aa13.79□□□□□ -0.2
CTNS-203ENST00000399306 ZNF695Q8IW36 515 aa13.79□□□□□ -0.2
CTNS-203ENST00000399306 SELENOHQ8IZQ5 122 aaKnown RBP13.79□□□□□ -0.2
CTNS-203ENST00000399306 QTRT1Q9BXR0 403 aaKnown RBP13.79□□□□□ -0.2
CTNS-203ENST00000399306 A0A0B4J2A0 478 aa13.78□□□□□ -0.2
CTNS-203ENST00000399306 LINC00854A0A1B0GVQ3 168 aa13.78□□□□□ -0.2
CTNS-203ENST00000399306 RPLP1P05386 114 aaKnown RBP13.78□□□□□ -0.2
CTNS-203ENST00000399306 PF4V1P10720 104 aa13.78□□□□□ -0.2
CTNS-203ENST00000399306 RUNX1Q01196 453 aa13.78□□□□□ -0.2
CTNS-203ENST00000399306 KIAA0141Q14154 515 aaPredicted RBP13.78□□□□□ -0.2
CTNS-203ENST00000399306 AARDQ4LEZ3 155 aa13.78□□□□□ -0.2
CTNS-203ENST00000399306 C10orf55Q5SWW7 151 aa13.78□□□□□ -0.2
CTNS-203ENST00000399306 MRPL41Q8IXM3 137 aaKnown RBP13.78□□□□□ -0.2
CTNS-203ENST00000399306 LGI3Q8N145 548 aa13.78□□□□□ -0.2
CTNS-203ENST00000399306 OR4A16Q8NH70 328 aa13.78□□□□□ -0.2
CTNS-203ENST00000399306 NDUFA4L2Q9NRX3 87 aa13.78□□□□□ -0.2
CTNS-203ENST00000399306 SHPKQ9UHJ6 478 aa13.78□□□□□ -0.2
CTNS-203ENST00000399306 TBC1D24Q9ULP9 559 aa13.78□□□□□ -0.2
CTNS-203ENST00000399306 TEX50A0A1B0GTY4 177 aa13.77□□□□□ -0.21
CTNS-203ENST00000399306 CGB1A6NKQ9 187 aa13.77□□□□□ -0.21
CTNS-203ENST00000399306 SFT2D2O95562 160 aa13.77□□□□□ -0.21
CTNS-203ENST00000399306 DHFRP00374 187 aa13.77□□□□□ -0.21
CTNS-203ENST00000399306 TCRBP04435 133 aa13.77□□□□□ -0.21
CTNS-203ENST00000399306 TRAPPC2P0DI81 140 aa13.77□□□□□ -0.21
CTNS-203ENST00000399306 TRAPPC2BP0DI82 140 aa13.77□□□□□ -0.21
CTNS-203ENST00000399306 TMEM268Q5VZI3 342 aa13.77□□□□□ -0.21
CTNS-203ENST00000399306 ZNF491Q8N8L2 437 aa13.77□□□□□ -0.21
CTNS-203ENST00000399306 LHFPL5Q8TAF8 219 aa13.77□□□□□ -0.21
CTNS-203ENST00000399306 OR51B2Q9Y5P1 312 aa13.77□□□□□ -0.21
CTNS-203ENST00000399306 A0A0G2JLM5 398 aa13.76□□□□□ -0.21
CTNS-203ENST00000399306 A0A1B0GW64 132 aa13.76□□□□□ -0.21
CTNS-203ENST00000399306 E7EUB6 86 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms