RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 AREGP15514 252 aa11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 ZNF182P17025 639 aaPredicted RBP11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 CTRB1P17538 263 aa11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 HLA-DMAP28067 261 aa11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 PSMB6P28072 239 aa11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 GPR107Q5VW38 600 aa11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 CTRB2Q6GPI1 263 aa11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 THOC7Q6I9Y2 204 aaKnown RBP11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 IL34Q6ZMJ4 242 aa11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 SNX29P2Q8IUI4 249 aa11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 DMBX1Q8NFW5 382 aa11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 FANCD2OSQ96PS1 177 aa11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 SRSF8Q9BRL6 282 aaKnown RBP11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 TMEM140Q9NV12 185 aa11.35□□□□□ -0.59
SMIM11A-203ENST00000399299 MARCH11A6NNE9 402 aa11.34□□□□□ -0.59
SMIM11A-203ENST00000399299 TPPPO94811 219 aa11.34□□□□□ -0.59
SMIM11A-203ENST00000399299 HIST1H1BP16401 226 aaKnown RBP11.34□□□□□ -0.59
SMIM11A-203ENST00000399299 ALDH3B2P48448 385 aa11.34□□□□□ -0.59
SMIM11A-203ENST00000399299 OR2B8PP59922 312 aa11.34□□□□□ -0.59
SMIM11A-203ENST00000399299 ERVK-16P61578 105 aa11.34□□□□□ -0.59
SMIM11A-203ENST00000399299 LPCAT3Q6P1A2 487 aa11.34□□□□□ -0.59
SMIM11A-203ENST00000399299 DGCR14Q96DF8 476 aaKnown RBP11.34□□□□□ -0.59
SMIM11A-203ENST00000399299 COMMD5Q9GZQ3 224 aa11.34□□□□□ -0.59
SMIM11A-203ENST00000399299 FAM212BQ9NTI7 297 aaPredicted RBP11.34□□□□□ -0.59
SMIM11A-203ENST00000399299 PEMTQ9UBM1 199 aa11.34□□□□□ -0.59
SMIM11A-203ENST00000399299 FBXL7Q9UJT9 491 aa11.34□□□□□ -0.59
SMIM11A-203ENST00000399299 TRAV3A0A0B4J244 114 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 IGLC7A0M8Q6 106 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 FAM25AB3EWG3 89 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 FAM25CB3EWG5 89 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 FAM25GB3EWG6 89 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 CSN3P07498 182 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 MYOD1P15172 320 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 S100GP29377 79 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 TSPAN5P62079 268 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 C19orf35Q6ZS72 473 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 GPR141Q7Z602 305 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 HAPLN4Q86UW8 402 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 WWC2-AS2Q96NR7 200 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 QTRT1Q9BXR0 403 aaKnown RBP11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 DMRT1Q9Y5R6 373 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 U3KQK5 164 aa11.33□□□□□ -0.6
SMIM11A-203ENST00000399299 IGLV11-55A0A075B6I3 123 aa11.32□□□□□ -0.6
SMIM11A-203ENST00000399299 H0Y980 276 aa11.32□□□□□ -0.6
SMIM11A-203ENST00000399299 NDUFB8O95169 186 aa11.32□□□□□ -0.6
SMIM11A-203ENST00000399299 UCP3P55916 312 aa11.32□□□□□ -0.6
SMIM11A-203ENST00000399299 ZNF585BQ52M93 769 aa11.32□□□□□ -0.6
SMIM11A-203ENST00000399299 HSD17B13Q7Z5P4 300 aaPredicted RBP11.32□□□□□ -0.6
SMIM11A-203ENST00000399299 C15orf40Q8WUR7 153 aa11.32□□□□□ -0.6
SMIM11A-203ENST00000399299 FCAMRQ8WWV6 532 aa11.32□□□□□ -0.6
SMIM11A-203ENST00000399299 CCDC140Q96MF4 163 aa11.32□□□□□ -0.6
SMIM11A-203ENST00000399299 GGCTO75223 188 aaKnown RBP11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 DEFA4P12838 97 aa11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 LPAR6P43657 344 aa11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 MECP2P51608 486 aaKnown RBP11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 LCN12Q6JVE5 192 aa11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 SLC38A6Q8IZM9 456 aa11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 Q8N1Y9 231 aa11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 Q8N402 240 aa11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 OR1L8Q8NGR8 309 aa11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 OR2K2Q8NGT1 345 aa11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 EEF1AKMT3Q96AZ1 226 aa11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 CXorf58Q96LI9 332 aa11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 EXTL2Q9UBQ6 330 aa11.31□□□□□ -0.6
SMIM11A-203ENST00000399299 TRBV7-1A0A0A6YYK4 115 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 A8MZ25 164 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 PPP5D1E7EU14 171 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 LGALS9O00182 355 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 KRASP01116 189 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 REG1AP05451 166 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 FRMD6-AS1P0C7T7 363 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 TRAPPC2P0DI81 140 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 TRAPPC2BP0DI82 140 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 TBPP20226 339 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 PTBP1P26599 531 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 PHLDA2Q53GA4 152 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 GPHB5Q86YW7 130 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 ARRDC1Q8N5I2 433 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 OR52I2Q8NH67 350 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 TSC22D3Q99576 134 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 ASCL2Q99929 193 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 KLK11Q9UBX7 282 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 MTFP1Q9UDX5 166 aa11.3□□□□□ -0.6
SMIM11A-203ENST00000399299 TEX50A0A1B0GTY4 177 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 M0QYG6 137 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 CYB5BO43169 146 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 RPA2P15927 270 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 G6PCP35575 357 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 ARL3P36405 182 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 RNASE10Q5GAN6 216 aaKnown RBP11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 CLEC19AQ6UXS0 136 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 TBC1D26Q86UD7 250 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 LHFPL1Q86WI0 220 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 SGPP2Q8IWX5 399 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 GDPD1Q8N9F7 314 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 OR10W1Q8NGF6 305 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 RAB2BQ8WUD1 216 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 ZNF486Q96H40 463 aaPredicted RBP11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 ABHD1Q96SE0 405 aa11.29□□□□□ -0.6
SMIM11A-203ENST00000399299 BCL7BQ9BQE9 202 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms