RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 TMEM178BH3BS89 294 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 YIF1AO95070 293 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 IGKV1-16P04430 117 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 BSXQ3C1V8 233 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 PRR30Q53SZ7 412 aaPredicted RBP11.34□□□□□ -0.59
PRAME-202ENST00000398743 FAM210BQ96KR6 192 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 ZNF714Q96N38 554 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 PATZ1Q9HBE1 687 aaKnown RBP11.34□□□□□ -0.59
PRAME-202ENST00000398743 ZNRD1Q9P1U0 126 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 LSM4Q9Y4Z0 139 aaKnown RBP11.34□□□□□ -0.59
PRAME-202ENST00000398743 CEP250Q9BV73 2442 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 DOCK11Q5JSL3 2073 aa11.34□□□□□ -0.59
PRAME-202ENST00000398743 DMXL2Q8TDJ6 3036 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 K7ENP7 123 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 S100A9P06702 114 aaKnown RBP11.33□□□□□ -0.6
PRAME-202ENST00000398743 SMIM6P0DI80 62 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 RPL23P62829 140 aaKnown RBP11.33□□□□□ -0.6
PRAME-202ENST00000398743 RBPJQ06330 500 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 MIC13Q5XKP0 118 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 TEPPQ6URK8 271 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 CCL17Q92583 94 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 HINT2Q9BX68 163 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 NGBQ9NPG2 151 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 ZNF257Q9Y2Q1 563 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 RP1L1Q8IWN7 2480 aaPredicted RBP11.33□□□□□ -0.6
PRAME-202ENST00000398743 J3QR06 171 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 CA2P00918 260 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 IL6RP08887 468 aaPredicted RBP11.33□□□□□ -0.6
PRAME-202ENST00000398743 CTAG1AP78358 180 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 S100A12P80511 92 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 ARSJQ5FYB0 599 aaPredicted RBP11.33□□□□□ -0.6
PRAME-202ENST00000398743 ZNF833PQ6ZTB9 187 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 WFIKKN1Q96NZ8 548 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 SSX3Q99909 188 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 SCNM1Q9BWG6 230 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 PLEKHA3Q9HB20 300 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 TMEM106BQ9NUM4 274 aa11.33□□□□□ -0.6
PRAME-202ENST00000398743 DYSFO75923 2080 aa11.32□□□□□ -0.6
PRAME-202ENST00000398743 DSCAML1Q8TD84 2053 aa11.32□□□□□ -0.6
PRAME-202ENST00000398743 TANC2Q9HCD6 1990 aa11.32□□□□□ -0.6
PRAME-202ENST00000398743 MUC6Q6W4X9 2439 aa11.32□□□□□ -0.6
PRAME-202ENST00000398743 TRBV24-1A0A075B6N3 115 aa11.32□□□□□ -0.6
PRAME-202ENST00000398743 UPK2O00526 184 aa11.32□□□□□ -0.6
PRAME-202ENST00000398743 PDE6DO43924 150 aa11.32□□□□□ -0.6
PRAME-202ENST00000398743 MYOD1P15172 320 aa11.32□□□□□ -0.6
PRAME-202ENST00000398743 CCL3L1P16619 93 aa11.32□□□□□ -0.6
PRAME-202ENST00000398743 PRCDQ00LT1 54 aa11.32□□□□□ -0.6
PRAME-202ENST00000398743 RND1Q92730 232 aa11.32□□□□□ -0.6
PRAME-202ENST00000398743 HCFC1P51610 2035 aa11.32□□□□□ -0.6
PRAME-202ENST00000398743 SRRM4A7MD48 611 aaKnown RBP11.31□□□□□ -0.6
PRAME-202ENST00000398743 TGOLN2O43493 480 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 TRGC2P03986 189 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 STAG3L2P0CL84 134 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 STAG3L3P0CL85 134 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 B2MP61769 119 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 RAB31Q13636 194 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 TMEM200BQ69YZ2 307 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 C16orf82Q7Z2V1 217 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 RNASE6Q93091 150 aaKnown RBP11.31□□□□□ -0.6
PRAME-202ENST00000398743 C1orf159Q96HA4 380 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 PLCE1Q9P212 2302 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 NDUFB3O43676 98 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 CXorf1O96002 111 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 APOA2P02652 100 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 UBE2G2P60604 165 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 LRRC10Q5BKY1 277 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 NCMAPQ5T1S8 102 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 SSMEM1Q8WWF3 244 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 H1FXQ92522 213 aaKnown RBP11.31□□□□□ -0.6
PRAME-202ENST00000398743 DYNLRB1Q9NP97 96 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 FKBP11Q9NYL4 201 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 BET1LQ9NYM9 111 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 CUL9Q8IWT3 2517 aa11.31□□□□□ -0.6
PRAME-202ENST00000398743 DCHS1Q96JQ0 3298 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 FNDC10F2Z333 226 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 HIST1H2BKO60814 126 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 FCN3O75636 299 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 VENTXO95231 258 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 HIST1H2BJP06899 126 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 ARL14EPLP0DKL9 152 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 HIST1H2BOP23527 126 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 HIST1H2BBP33778 126 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 HIST1H2BDP58876 126 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 HIST1H2BCP62807 126 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 HIST2H2BEQ16778 126 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.3□□□□□ -0.6
PRAME-202ENST00000398743 CST9LP1Q5W188 147 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 SPNS3Q6ZMD2 512 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 STPG3Q8N7X2 389 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 OSR1Q8TAX0 266 aaPredicted RBP11.3□□□□□ -0.6
PRAME-202ENST00000398743 HIST1H2BHQ93079 126 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 HIST1H2BNQ99877 126 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 HIST1H2BMQ99879 126 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 MRPL20Q9BYC9 149 aaKnown RBP11.3□□□□□ -0.6
PRAME-202ENST00000398743 DOK5Q9P104 306 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 SHISA9B4DS77 424 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 H7BYZ3 331 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 SAA1P0DJI8 122 aaPredicted RBP11.3□□□□□ -0.6
PRAME-202ENST00000398743 ATP5G3P48201 142 aa11.3□□□□□ -0.6
PRAME-202ENST00000398743 OR5B3Q8NH48 314 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms