RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 Q6P435 159 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 PQLC2Q6ZP29 291 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 SPACA3Q8IXA5 215 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 SAXO1Q8IYX7 474 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 SCCPDHQ8NBX0 429 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 C7orf69Q9H7B7 122 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 MUC3AQ02505 3323 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 ROS1P08922 2347 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 EXPH5Q8NEV8 1989 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 C15orf62A8K5M9 175 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 HYPMO75409 117 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 HBZP02008 142 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 GPX1P07203 203 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 OR9G9P0C7N8 305 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 CRYBB3P26998 211 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 COMPP49747 757 aaPredicted RBP8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 BRWD1-AS2P59051 145 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 RPEL1Q2QD12 228 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 COLCA1Q6ZS62 124 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 IL36BQ9NZH7 164 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 KLF7O75840 302 aaPredicted RBP8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 OR10J4P0C629 311 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 GATA2P23769 480 aaPredicted RBP8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 YPEL3P61236 119 aaPredicted RBP8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 KRTAP27-1Q3LI81 207 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 RIPPLY2Q5TAB7 128 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 ZNF497Q6ZNH5 498 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 SMRP1Q8NCR6 262 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 AGBL5Q8NDL9 886 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 CDIP1Q9H305 208 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 SIT1Q9Y3P8 196 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 TRAV3A0A0B4J244 114 aa8.21□□□□□ -1.09
PTCHD4-202ENST00000398738 PIGBOS1A0A0B4J2F0 54 aa8.21□□□□□ -1.09
PTCHD4-202ENST00000398738 C3orf79P0CE67 100 aa8.21□□□□□ -1.09
PTCHD4-202ENST00000398738 SRSF7Q16629 238 aaKnown RBP eCLIP8.21□□□□□ -1.093e-7■■■■■ 29.7
PTCHD4-202ENST00000398738 HES3Q5TGS1 186 aa8.21□□□□□ -1.09
PTCHD4-202ENST00000398738 WDR86Q86TI4 376 aa8.21□□□□□ -1.09
PTCHD4-202ENST00000398738 ZNF645Q8N7E2 425 aa8.21□□□□□ -1.09
PTCHD4-202ENST00000398738 BORCS7Q96B45 105 aa8.21□□□□□ -1.09
PTCHD4-202ENST00000398738 STRADBQ9C0K7 418 aa8.21□□□□□ -1.09
PTCHD4-202ENST00000398738 OBP2BQ9NPH6 170 aa8.21□□□□□ -1.09
PTCHD4-202ENST00000398738 CLCF1Q9UBD9 225 aa8.21□□□□□ -1.09
PTCHD4-202ENST00000398738 ARFGEF3Q5TH69 2177 aa8.21□□□□□ -1.09
PTCHD4-202ENST00000398738 DPRXA6NFQ7 191 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 FAM90A26D6RGX4 464 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 H0Y8G0 127 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 CFIP05156 583 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 CELA3BP08861 270 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 VAMP3Q15836 100 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 C1orf174Q8IYL3 243 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 OR4B1Q8NGF8 309 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 OR4A16Q8NH70 328 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 FAM216AQ8WUB2 273 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 POM121L2Q96KW2 1035 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 RNF2Q99496 336 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 PHF7Q9BWX1 381 aaPredicted RBP8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 CADP27708 2225 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 GPR179Q6PRD1 2367 aa8.21□□□□□ -1.1
PTCHD4-202ENST00000398738 NCOR1O75376 2440 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 J3QT63 122 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 GPR6P46095 362 aaPredicted RBP8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 ZNF83P51522 516 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 LEMD1Q68G75 181 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 TREML4Q6UXN2 200 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 Q6ZS46 218 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 OR2M7Q8NG81 312 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 KCNE4Q8WWG9 221 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 UQCR10Q9UDW1 63 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 PLA2G2DQ9UNK4 145 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 WDR83OSQ9Y284 106 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 TPRP12270 2363 aaKnown RBP8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 TNCP24821 2201 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 ZDBF2Q9HCK1 2354 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 A0A1W2PS18 150 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 CD99P14209 185 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 MYOD1P15172 320 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 FOLR3P41439 243 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 GNG4P50150 75 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 PSG5Q15238 335 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 CENPWQ5EE01 88 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 OR4C5Q8NGB2 326 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 LEAP2Q969E1 77 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 SGK494Q96LW2 274 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 MGST2Q99735 147 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 M0QZ24 198 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 OR7C2O60412 319 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 HAND1O96004 215 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 IGLC2P0DOY2 106 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 IGLC3P0DOY3 106 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 GCHFRP30047 84 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 LGALS4P56470 323 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 TMEM177Q53S58 311 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 FBXW9Q5XUX1 488 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 PRR27Q6MZM9 219 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 LINC00696Q6ZRV3 163 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 C22orf15Q8WYQ4 148 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 HSD17B10Q99714 261 aaKnown RBP8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 GNG12Q9UBI6 72 aa8.2□□□□□ -1.1
PTCHD4-202ENST00000398738 LOC400499M0QZD8 3231 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 HELTA6NFD8 242 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms