RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PCNX1Q96RV3 2341 aa11.96□□□□□ -0.5
PCDHGA11-201ENST00000398587 TEX50A0A1B0GTY4 177 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 MDKP21741 143 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 TMEM208Q9BTX3 173 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 NPCDR1Q9BY65 106 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 E9PQ18 207 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 FOXH1O75593 365 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 TRGC2P03986 189 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 TIMP3P35625 211 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 LRTM2Q8N967 370 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 DPM3Q9P2X0 92 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 IL18BPO95998 194 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 FOXF2Q12947 444 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 SRSF7Q16629 238 aaKnown RBP eCLIP11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 FOXL2NBQ6ZUU3 175 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 TMEM191AQ9H0A3 160 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 OR51M1Q9H341 326 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 CARHSP1Q9Y2V2 147 aaKnown RBP11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 WNK2Q9Y3S1 2297 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 MPDZO75970 2070 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 IGKV1-27A0A075B6S5 117 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 REG1AP05451 166 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 KIR2DL2P43627 348 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 ATP5J2P56134 94 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 LOXL3P58215 753 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 TMEM42Q69YG0 159 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 RNASE6Q93091 150 aaKnown RBP11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 PIMREGQ9BSJ6 248 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 RABAC1Q9UI14 185 aa11.95□□□□□ -0.5
PCDHGA11-201ENST00000398587 PLXNA2O75051 1894 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 SCN8AQ9UQD0 1980 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 TRAV20A0A0B4J274 112 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 BMPR1BO00238 502 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 PDLIM4P50479 330 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 ID3Q02535 119 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 CACNA1BQ00975 2339 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 NPIPB11E5RHQ5 1161 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 GCHFRP30047 84 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 C5orf63A6NC05 138 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 RPL29P47914 159 aaKnown RBP11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 CD81P60033 236 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 FXYD3Q14802 87 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 ZNF525Q8N782 197 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 IFI27L2Q9H2X8 130 aa11.94□□□□□ -0.5
PCDHGA11-201ENST00000398587 TMSB15BA0A087X1C1 80 aa11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 CRYBB3P26998 211 aa11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 PTTG1IPP53801 180 aa11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 EIF4E3Q8N5X7 224 aaKnown RBP11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 ZNF98A6NK75 572 aa11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 PF4V1P10720 104 aa11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 PAFAH1B2P68402 229 aa11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 BIVMQ86UB2 503 aa11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 F8VVB4 439 aa11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 F8VWA3 439 aa11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 IL6RP08887 468 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 AGAP20933 346 aa11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 FCGR2BP31994 310 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 HOXA4Q00056 320 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 ZNF324BQ6AW86 544 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 SPACA3Q8IXA5 215 aa11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 RBFOX2O43251 390 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCDHGA11-201ENST00000398587 FANCMQ8IYD8 2048 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 E9PLN8 166 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 VAMP3Q15836 100 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 MORN2Q502X0 79 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 METTL26Q96S19 204 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 VKORC1Q9BQB6 163 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 KIAA2026Q5HYC2 2103 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 FER1L5A0AVI2 2057 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 SRRM5B3KS81 715 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 IGHV3-48P01763 117 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 RPL7P18124 248 aaKnown RBP11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 LY6G6EA0A0G2JKS1 128 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 HLA-DQA1P01909 254 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 ZNF137PP52743 207 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 SLC35B1P78383 322 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 QRFPP83859 136 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 U3KQA8 63 aa11.92□□□□□ -0.5
PCDHGA11-201ENST00000398587 ID1P41134 155 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 MRPL20Q9BYC9 149 aaKnown RBP11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 A0A1W2PS18 150 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 VENTXO95231 258 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 PRSS1P07477 247 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 TMEM78Q5T7P6 136 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 CYP2G1PQ6ZSU1 146 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 J3KRW8 73 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 NAPSAO96009 420 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 CCL3L1P16619 93 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 SUPT4H1P63272 117 aaKnown RBP11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 RTN4RL2Q86UN3 420 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 CACNG8Q8WXS5 425 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 HIST1H2BAQ96A08 127 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 HSPB7Q9UBY9 170 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 CA7P43166 264 aa11.91□□□□□ -0.5
PCDHGA11-201ENST00000398587 HELZP42694 1942 aaKnown RBP11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 RRHO14718 337 aa11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 FBXL15Q9H469 300 aa11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 IGHG3P01860 377 aa11.9□□□□□ -0.5
PCDHGA11-201ENST00000398587 SRP19P09132 144 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms