RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SPRR3Q9UBC9 169 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 CD59P13987 128 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 GALR1P47211 349 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 RTP5Q14D33 572 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF726P1Q15940 193 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 KHDC3LQ587J8 217 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 Q6ZPA2 131 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 TGIF2LYQ8IUE0 185 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 SDF2L1Q9HCN8 221 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 SPANXB1Q9NS25 103 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 CLEC5AQ9NY25 188 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 GYPAP02724 150 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 TRIP6Q15654 476 aaKnown RBP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 C10orf91Q5T1B1 145 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 BHLHA15Q7RTS1 189 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-202ENST00000398417 Q8IYB0 196 aa4.16□□□□□ -1.74
SMAD4-202ENST00000398417 TGOLN2O43493 480 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 SPINK4O60575 86 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 NPY1RP25929 384 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 RIPPLY3P57055 190 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 RNFT1Q5M7Z0 435 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 LRP11Q86VZ4 500 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 ZADH2Q8N4Q0 377 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 KLF14Q8TD94 323 aaPredicted RBP4.15□□□□□ -1.74
SMAD4-202ENST00000398417 NEIL1Q96FI4 390 aaPredicted RBP4.15□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF331Q9NQX6 463 aaPredicted RBP4.15□□□□□ -1.74
SMAD4-202ENST00000398417 TRAV38-1A0A0B4J264 116 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 PRDX2P32119 198 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 ZNF66Q6ZN08 573 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 HAPLN4Q86UW8 402 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 ODF3L1Q8IXM7 274 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 SIGLECL1Q8N7X8 197 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 VWA8A3KMH1 1905 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 CEP192Q8TEP8 1941 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 CYB5R3P00387 301 aaPredicted RBP4.15□□□□□ -1.74
SMAD4-202ENST00000398417 CD55P08174 381 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 FOLR2P14207 255 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 MYOD1P15172 320 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 HOXA5P20719 270 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 ATP5G3P48201 142 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 PSG7Q13046 419 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 NMSQ5H8A3 153 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 ABHD12Q8N2K0 398 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 SSMEM1Q8WWF3 244 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 GSN-AS1Q9NRJ2 163 aa4.15□□□□□ -1.74
SMAD4-202ENST00000398417 MC5RP33032 325 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 ZNF585BQ52M93 769 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 GCSAMLQ5JQS6 135 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 CMTM2Q8TAZ6 248 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 MUCL1Q96DR8 90 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 ONECUT1Q9UBC0 465 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 RNF24Q9Y225 148 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 FUT9Q9Y231 359 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 DSCAMO60469 2012 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 SSTR5P35346 364 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 Q6P435 159 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 PCSK4Q6UW60 755 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 COLCA1Q6ZS62 124 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 LINC00596Q86U02 117 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 C9orf106Q8NAJ2 232 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 OR4X1Q8NH49 305 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 ARL2-SNX15V9GYD0 113 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 WISP2O76076 250 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 GCGP01275 180 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 ATP6V1FQ16864 119 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 RPEL1Q2QD12 228 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 RPL39P5Q59GN2 51 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 MIC13Q5XKP0 118 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 INO80CQ6PI98 192 aaPredicted RBP4.15□□□□□ -1.75
SMAD4-202ENST00000398417 FAM214BQ7L5A3 538 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 MRGPRGQ86SM5 289 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 C10orf126Q8N4M7 172 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 ITLN1Q8WWA0 313 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 MRPS18CQ9Y3D5 142 aaKnown RBP4.15□□□□□ -1.75
SMAD4-202ENST00000398417 RNF115Q9Y4L5 304 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 PLXNA3P51805 1871 aa4.15□□□□□ -1.75
SMAD4-202ENST00000398417 NAPSAO96009 420 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 MRPS11P82912 194 aaKnown RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 ZNF645Q8N7E2 425 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 ZNF738Q8NE65 137 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 MRPL20Q9BYC9 149 aaKnown RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 SMG1Q96Q15 3661 aaKnown RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 CDX1P47902 265 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 WDR86Q86TI4 376 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 LYG1Q8N1E2 194 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 RCC1LQ96I51 464 aaKnown RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 ELOVL1Q9BW60 279 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 IGKV3D-15A0A087WSY6 115 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 PSPNO60542 156 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 CXorf1O96002 111 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 SNRPCP09234 159 aaKnown RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 ACSM6Q6P461 480 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 CCL13Q99616 98 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 SIRT7Q9NRC8 400 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 ELOA3CA0A087WX78 387 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 CTXND1A0A1B0GTU2 59 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 TMEM210A6NLX4 147 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 IL18BPO95998 194 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 OR5I1Q13606 314 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 ZNF124Q15973 351 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms