RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 FAM87AP0C7U9 286 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 C9orf135Q5VTT2 229 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 MEX3BQ6ZN04 569 aaKnown RBP4.83□□□□□ -1.64
PTPRD-206ENST00000397617 TMEM116Q8NCL8 245 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 OR4P4Q8NGL7 312 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 OR1L1Q8NH94 360 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 PYGO2Q9BRQ0 406 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 C1QTNF6Q9BXI9 259 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 WASHC3Q9Y3C0 194 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 FAM96BQ9Y3D0 163 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 PROP1O75360 226 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 GRPP07492 148 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 RHOBP62745 196 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 PRAMEF5Q5TYX0 476 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 PRAMEF6Q5VXH4 476 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 MUC15Q8N387 334 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 CD177Q8N6Q3 437 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 DAZAP1Q96EP5 407 aaKnown RBP4.83□□□□□ -1.64
PTPRD-206ENST00000397617 TMEM133Q9H2Q1 129 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 PSENENQ9NZ42 101 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 THYN1Q9P016 225 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 LSM5Q9Y4Y9 91 aaKnown RBP4.83□□□□□ -1.64
PTPRD-206ENST00000397617 A0A1W2PRE2 83 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 C9JCJ5 164 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 IGKV1-39P01597 117 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 IGKV1D-39P04432 117 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 CT45A6P0DMU7 189 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 CT45A5P0DMU8 189 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 CT45A7P0DMV0 189 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 GLIPR1P48060 266 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 RPL8P62917 257 aaKnown RBP4.83□□□□□ -1.64
PTPRD-206ENST00000397617 LRRC37A5PQ49AS3 106 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 CT45A1Q5HYN5 189 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 HSD17B11Q8NBQ5 300 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 CT45A3Q8NHU0 189 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 TYMSP04818 313 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 AREGP15514 252 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 ERHP84090 104 aaKnown RBP4.83□□□□□ -1.64
PTPRD-206ENST00000397617 SERTM2A0A1B0GWG4 89 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 A6NNC1 897 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 COL10A1Q03692 680 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 MOGAT3Q86VF5 341 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 OR10G7Q8NGN6 311 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 RCC1LQ96I51 464 aaKnown RBP4.83□□□□□ -1.64
PTPRD-206ENST00000397617 SZT2Q5T011 3432 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 FAM221AA4D161 298 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 F8W036 122 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 OR4A8P0C604 315 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 BSPH1Q075Z2 132 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 OR1P1Q8NH06 330 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 WFIKKN1Q96NZ8 548 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 GAFA1Q96PS6 74 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 LPAR2Q9HBW0 351 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 HEYLQ9NQ87 328 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-206ENST00000397617 RPRMQ9NS64 109 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 SLC35D1Q9NTN3 355 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 IGSF23A1L1A6 192 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 RBFOX3A6NFN3 312 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 UPK2O00526 184 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 TOX4O94842 621 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 COA6Q5JTJ3 125 aaKnown RBP4.83□□□□□ -1.64
PTPRD-206ENST00000397617 FAM74A1Q5RGS3 127 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 TGIF2LXQ8IUE1 241 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 SLC24A4Q8NFF2 622 aa4.83□□□□□ -1.64
PTPRD-206ENST00000397617 H3BSH0 61 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 ETV3LQ6ZN32 361 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 THNSL2Q86YJ6 484 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 LHX4Q969G2 390 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 ASF1BQ9NVP2 202 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 IGHV1-69-2A0A0G2JMI3 117 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 RSPO4Q2I0M5 234 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-206ENST00000397617 SP6Q3SY56 376 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 TEPPQ6URK8 271 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 OR4A16Q8NH70 328 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 CLEC7AQ9BXN2 247 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 SPANXDQ9BXN6 97 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 PMS2P5A8MQ11 134 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 SHISA9B4DS77 424 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 PRSS46E5RG02 174 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 STAG3L3P0CL85 134 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 TMEM41BQ5BJD5 291 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 NEUROG1Q92886 237 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 UHRF2Q96PU4 802 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 TET2Q6N021 2002 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-206ENST00000397617 DEFA5Q01523 94 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 CXorf66Q5JRM2 361 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-206ENST00000397617 FLYWCH2Q96CP2 140 aaKnown RBP4.82□□□□□ -1.64
PTPRD-206ENST00000397617 M0R1B8 84 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 SPATA46Q5T0L3 261 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 SLC7A5P1Q8MH63 180 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 OR4C12Q96R67 309 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 M0R1X1 148 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 LILRA1O75019 489 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 CCL2P13500 99 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 AESQ08117 197 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 ALKBH6Q3KRA9 238 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 TMEM140Q9NV12 185 aa4.82□□□□□ -1.64
PTPRD-206ENST00000397617 CLDN34H7C241 214 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 M0QZ24 198 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 ENSAO43768 121 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms