RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 PPIAL4DF5H284 164 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 CD3EP07766 207 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 PPIAL4FP0DN26 164 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 UQCRFS1P47985 274 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 RIGQ13278 110 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 SLC25A53Q5H9E4 307 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 TMEM116Q8NCL8 245 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 PILRBQ9UKJ0 227 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 PPIAL4AQ9Y536 164 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 A8MWL6 223 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 TMEM250H0YL14 139 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 C16orf97H3BN30 126 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 RPL27AP46776 148 aaKnown RBP9.11□□□□□ -0.95
CCDC40-204ENST00000397545 RPL8P62917 257 aaKnown RBP9.11□□□□□ -0.95
CCDC40-204ENST00000397545 HILPDAQ9Y5L2 63 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 HOXA5P20719 270 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 GATA2P23769 480 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-204ENST00000397545 FGFBP3Q8TAT2 258 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 NEU1Q99519 415 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 NABP2Q9BQ15 211 aa9.11□□□□□ -0.95
CCDC40-204ENST00000397545 PGPEP1LA6NFU8 196 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 SAXO1Q8IYX7 474 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 STXBP6Q8NFX7 210 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 CLDND2Q8NHS1 167 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 NPIPB3Q92617 1050 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 SFRP2Q96HF1 295 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 PGLYRP4Q96LB8 373 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 AMMECR1Q9Y4X0 333 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-204ENST00000397545 PCNX3Q9H6A9 2034 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 IGKV1-12A0A0C4DH73 117 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 IGKV1D-12P01611 117 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 FTH1P19P0C7X4 201 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 NMUP48645 174 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 FOXG1P55316 489 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-204ENST00000397545 GFI1BQ5VTD9 330 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 PEAR1Q5VY43 1037 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-204ENST00000397545 REC114Q7Z4M0 266 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 C17orf82Q86X59 251 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-204ENST00000397545 TMEM183AQ8IXX5 376 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 RAB1CQ92928 201 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 SPOCK3Q9BQ16 436 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 PSMG3Q9BT73 122 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-204ENST00000397545 REPIN1Q9BWE0 567 aaKnown RBP9.1□□□□□ -0.95
CCDC40-204ENST00000397545 FAM117AQ9C073 453 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 WNT10AQ9GZT5 417 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 LRP4O75096 1905 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 OTOGLQ3ZCN5 2332 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 CTAG1AP78358 180 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 LRRC75BQ2VPJ9 315 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 CYP2G1PQ6ZSU1 146 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 STPG3Q8N7X2 389 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 NPCDR1Q9BY65 106 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 CHRNA10Q9GZZ6 450 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 CYTL1Q9NRR1 136 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 TNFRSF19Q9NS68 423 aa9.1□□□□□ -0.95
CCDC40-204ENST00000397545 COLCA2A8K830 154 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 C1QTNF9BB2RNN3 333 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 MT-ND6P03923 174 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 GCHFRP30047 84 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 CEACAM3P40198 252 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 CENPWQ5EE01 88 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 BPIFA4PQ86YQ2 179 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 FAM89BQ8N5H3 189 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 SPSB4Q96A44 273 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 ZNF581Q9P0T4 197 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 GOSR1O95249 250 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 CGAP01215 116 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 CELA3BP08861 270 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 C8orf88P0DMB2 117 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HTN1P15515 57 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 RPL7P18124 248 aaKnown RBP9.09□□□□□ -0.95
CCDC40-204ENST00000397545 COMPP49747 757 aaPredicted RBP9.09□□□□□ -0.95
CCDC40-204ENST00000397545 COTL1Q14019 142 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 ICAM4Q14773 271 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 ZNF525Q8N782 197 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 ZNF714Q96N38 554 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 MS4A5Q9H3V2 200 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 SDF2L1Q9HCN8 221 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 DNAJC4Q9NNZ3 241 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 WNK1Q9H4A3 2382 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 CHD8Q9HCK8 2581 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HIST1H2BKO60814 126 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HLA-DQA1P01909 254 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HIST1H2BJP06899 126 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HIST1H2BOP23527 126 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HIST1H2BBP33778 126 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HIST1H2BDP58876 126 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HIST1H2BCP62807 126 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HIST2H2BEQ16778 126 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.09□□□□□ -0.95
CCDC40-204ENST00000397545 C19orf35Q6ZS72 473 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 OR13A1Q8NGR1 328 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HIST1H2BHQ93079 126 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 WBP1Q96G27 269 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 IMMP1LQ96LU5 166 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HIST1H2BNQ99877 126 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 HIST1H2BMQ99879 126 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 VPS13AQ96RL7 3174 aa9.09□□□□□ -0.95
CCDC40-204ENST00000397545 SCO2A0A1W2PP80 73 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 CGB1A6NKQ9 187 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms