RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CHST1O43916 411 aa16.91■□□□□ 0.3
CPNE1-204ENST00000397443 DEDDO75618 318 aa16.91■□□□□ 0.3
CPNE1-204ENST00000397443 RLN2P04090 185 aa16.91■□□□□ 0.3
CPNE1-204ENST00000397443 C10orf55Q5SWW7 151 aa16.91■□□□□ 0.3
CPNE1-204ENST00000397443 THNSL2Q86YJ6 484 aa16.91■□□□□ 0.3
CPNE1-204ENST00000397443 TEX45Q8NA69 505 aa16.91■□□□□ 0.3
CPNE1-204ENST00000397443 RBKSQ9H477 322 aa16.91■□□□□ 0.3
CPNE1-204ENST00000397443 TMEM14BQ9NUH8 114 aa16.91■□□□□ 0.3
CPNE1-204ENST00000397443 PRNDQ9UKY0 176 aa16.91■□□□□ 0.3
CPNE1-204ENST00000397443 CEBPZOSA8MTT3 80 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 FCN1O00602 326 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 ARPC5O15511 151 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 PET100P0DJ07 73 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 TNXAQ16473 311 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 PPP1R27Q86WC6 154 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 HSPB7Q9UBY9 170 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 SYNGR2O43760 224 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 CRYGBP07316 175 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 MRGPRG-AS1Q2M3A8 158 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 PRSS54Q6PEW0 395 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 NPBQ8NG41 125 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 ZNF48Q96MX3 618 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-204ENST00000397443 COMMD5Q9GZQ3 224 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 PLSCR3Q9NRY6 295 aa16.9■□□□□ 0.3
CPNE1-204ENST00000397443 FOXA2Q9Y261 457 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-204ENST00000397443 H3BP45 60 aa16.89■□□□□ 0.29
CPNE1-204ENST00000397443 SPDEFO95238 335 aa16.89■□□□□ 0.29
CPNE1-204ENST00000397443 IGHV4-59P01825 116 aa16.89■□□□□ 0.29
CPNE1-204ENST00000397443 DYNLT3P51808 116 aa16.89■□□□□ 0.29
CPNE1-204ENST00000397443 AP2S1P53680 142 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-204ENST00000397443 PRSS8Q16651 343 aa16.89■□□□□ 0.29
CPNE1-204ENST00000397443 ZNF546Q86UE3 836 aa16.89■□□□□ 0.29
CPNE1-204ENST00000397443 OR4A5Q8NH83 315 aa16.89■□□□□ 0.29
CPNE1-204ENST00000397443 TCF19Q9Y242 345 aa16.89■□□□□ 0.29
CPNE1-204ENST00000397443 TEX50A0A1B0GTY4 177 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 L7N2F9 121 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 ACTL6BO94805 426 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 NDUFA3O95167 84 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 VAMP2P63027 116 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 C5orf64Q2M2E5 130 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 C9orf139Q6ZV77 190 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 ZNF429Q86V71 674 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 PPP1R14BQ96C90 147 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 HYLS1Q96M11 299 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 SLC25A33Q9BSK2 321 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 TMUB1Q9BVT8 246 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 SH2D7A6NKC9 451 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-204ENST00000397443 E7EUB6 86 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 CA2P00918 260 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 HNF1AP20823 631 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 HOXA1P49639 335 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-204ENST00000397443 CLEC9AQ6UXN8 241 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 MMD2Q8IY49 270 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 TEX29Q8N6K0 151 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 ZFP57Q9NU63 452 aa16.88■□□□□ 0.29
CPNE1-204ENST00000397443 FAM90A26D6RGX4 464 aa16.87■□□□□ 0.29
CPNE1-204ENST00000397443 TMEM50AO95807 157 aa16.87■□□□□ 0.29
CPNE1-204ENST00000397443 APELAP0DMC3 54 aa16.87■□□□□ 0.29
CPNE1-204ENST00000397443 SPCS3P61009 180 aa16.87■□□□□ 0.29
CPNE1-204ENST00000397443 HSPE1P61604 102 aaKnown RBP16.87■□□□□ 0.29
CPNE1-204ENST00000397443 DTD1Q8TEA8 209 aa16.87■□□□□ 0.29
CPNE1-204ENST00000397443 FKBP11Q9NYL4 201 aa16.87■□□□□ 0.29
CPNE1-204ENST00000397443 SLC25A4P12235 298 aa16.86■□□□□ 0.29
CPNE1-204ENST00000397443 PVALBP20472 110 aaPredicted RBP16.86■□□□□ 0.29
CPNE1-204ENST00000397443 CAV2P51636 162 aa16.86■□□□□ 0.29
CPNE1-204ENST00000397443 Q8N9W7 124 aa16.86■□□□□ 0.29
CPNE1-204ENST00000397443 GSX1Q9H4S2 264 aaPredicted RBP16.86■□□□□ 0.29
CPNE1-204ENST00000397443 C1RLQ9NZP8 487 aa16.86■□□□□ 0.29
CPNE1-204ENST00000397443 E5RGE8 158 aa16.86■□□□□ 0.29
CPNE1-204ENST00000397443 MED6O75586 246 aa16.86■□□□□ 0.29
CPNE1-204ENST00000397443 CNIH1O95406 144 aa16.86■□□□□ 0.29
CPNE1-204ENST00000397443 AARDQ4LEZ3 155 aa16.86■□□□□ 0.29
CPNE1-204ENST00000397443 OR10W1Q8NGF6 305 aa16.86■□□□□ 0.29
CPNE1-204ENST00000397443 RBM14Q96PK6 669 aaKnown RBP16.86■□□□□ 0.29
CPNE1-204ENST00000397443 PAIP2BQ9ULR5 123 aaKnown RBP16.86■□□□□ 0.29
CPNE1-204ENST00000397443 FGF2P09038 288 aa16.85■□□□□ 0.29
CPNE1-204ENST00000397443 IER3P46695 156 aa16.85■□□□□ 0.29
CPNE1-204ENST00000397443 SIGLECL1Q8N7X8 197 aa16.85■□□□□ 0.29
CPNE1-204ENST00000397443 OR1L8Q8NGR8 309 aa16.85■□□□□ 0.29
CPNE1-204ENST00000397443 RASL11BQ9BPW5 248 aa16.85■□□□□ 0.29
CPNE1-204ENST00000397443 F8P00451 2351 aa16.85■□□□□ 0.29
CPNE1-204ENST00000397443 ANK3Q12955 4377 aaKnown RBP16.85■□□□□ 0.29
CPNE1-204ENST00000397443 FAM24AA6NFZ4 105 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 MSGN1A6NI15 193 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 PAX9P55771 341 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 INO80EQ8NBZ0 244 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-204ENST00000397443 OR5B3Q8NH48 314 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 OR52E5Q8NH55 327 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 DUX5Q96PT3 197 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 MFFQ9GZY8 342 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 PLEKHA3Q9HB20 300 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 ENY2Q9NPA8 101 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 HEYLQ9NQ87 328 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-204ENST00000397443 ZC4H2Q9NQZ6 224 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 PSENENQ9NZ42 101 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 TNFSF18Q9UNG2 199 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 ZNF257Q9Y2Q1 563 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 BOLA1Q9Y3E2 137 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 A6NDX4 124 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 HOXA3O43365 443 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms