RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 PDCD5O14737 125 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 SPRY2O43597 315 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 CLEC3BP05452 202 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 ZNF735P0CB33 412 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 HSMCR30P0CW71 290 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 HIST1H1DP16402 221 aaKnown RBP6.52□□□□□ -1.37
CAPN3-208ENST00000397204 CD36P16671 472 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 EDN2P20800 178 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 DTYMKP23919 212 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 APOC4P55056 127 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 ELLP55199 621 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-208ENST00000397204 RPS25P62851 125 aaKnown RBP6.52□□□□□ -1.37
CAPN3-208ENST00000397204 MLLT11Q13015 90 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-208ENST00000397204 PLA2G7Q13093 441 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 ARFRP1Q13795 201 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 OGFRL1Q5TC84 451 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-208ENST00000397204 PUSL1Q8N0Z8 303 aaKnown RBP6.52□□□□□ -1.37
CAPN3-208ENST00000397204 OR2C3Q8N628 320 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 OR1L6Q8NGR2 347 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 TMEM167AQ8TBQ9 72 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 CACNG8Q8WXS5 425 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 EEF1AKMT3Q96AZ1 226 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 CXorf58Q96LI9 332 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 CCDC140Q96MF4 163 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 HSD17B10Q99714 261 aaKnown RBP6.52□□□□□ -1.37
CAPN3-208ENST00000397204 AIFM2Q9BRQ8 373 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 DCSTAMPQ9H295 470 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 DUSP21Q9H596 190 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 MRPL27Q9P0M9 148 aaKnown RBP6.52□□□□□ -1.37
CAPN3-208ENST00000397204 RBMX2Q9Y388 322 aaKnown RBP6.52□□□□□ -1.37
CAPN3-208ENST00000397204 TPRKBQ9Y3C4 175 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 VPS13DQ5THJ4 4388 aa6.52□□□□□ -1.37
CAPN3-208ENST00000397204 A0A075B6Q4 140 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 KIR2DL5BA0A0G2JN68 375 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 KIR2DL5BA0A0G2JPC4 375 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 A0A0J9YWU9 116 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 E7EUB6 86 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 CASQ2O14958 399 aaPredicted RBP6.51□□□□□ -1.37
CAPN3-208ENST00000397204 KBTBD11O94819 623 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 SCAF4O95104 1147 aaKnown RBP6.51□□□□□ -1.37
CAPN3-208ENST00000397204 HRASP01112 189 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 DEFA4P12838 97 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 CTRB1P17538 263 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 RPL30P62888 115 aaKnown RBP6.51□□□□□ -1.37
CAPN3-208ENST00000397204 FABP5Q01469 135 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 PMS2P11Q13670 270 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 CDNFQ49AH0 187 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 ZNF585BQ52M93 769 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 HES5Q5TA89 166 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 CTRB2Q6GPI1 263 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 KCTD9Q7L273 389 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 LYG2Q86SG7 212 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 VKORC1L1Q8N0U8 176 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 KIR2DL5AQ8N109 375 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 TMEM217Q8N7C4 229 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 OR4S2Q8NH73 311 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 KIR2DL5BQ8NHK3 375 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 MGLLQ99685 303 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 VCXQ9H320 206 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 C5orf66Q9H5L9 145 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 RABL2BQ9UNT1 228 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 UFC1Q9Y3C8 167 aa6.51□□□□□ -1.37
CAPN3-208ENST00000397204 RYR1P21817 5038 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 IGLV11-55A0A075B6I3 123 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 IGKV1D-8A0A087WSZ0 117 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 A0A1B0GW64 132 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 IFITM5A6NNB3 132 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 J3QRK9 145 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 RGS10O43665 173 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 IGLV2-14P01704 120 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 IGHV3-23P01764 117 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 MYOD1P15172 320 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 AREGP15514 252 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 PTBP1P26599 531 aaKnown RBP eCLIP6.5□□□□□ -1.37
CAPN3-208ENST00000397204 BRWD1-AS2P59051 145 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 RPL8P62917 257 aaKnown RBP6.5□□□□□ -1.37
CAPN3-208ENST00000397204 EWSR1Q01844 656 aaKnown RBP eCLIP6.5□□□□□ -1.37
CAPN3-208ENST00000397204 RCN1Q15293 331 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 LAMTOR1Q6IAA8 161 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 CNIH2Q6PI25 160 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 BTNL8Q6UX41 500 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 ZNF66Q6ZN08 573 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 STPG3Q8N7X2 389 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 OR4A5Q8NH83 315 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 RNF183Q96D59 192 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 SPAG8Q99932 426 aaPredicted RBP6.5□□□□□ -1.37
CAPN3-208ENST00000397204 THYN1Q9P016 225 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 SELENOKQ9Y6D0 94 aa6.5□□□□□ -1.37
CAPN3-208ENST00000397204 IGKV1D-13A0A0B4J2D9 117 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 TSPAN4O14817 238 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 IGKV1-13P0DP09 117 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 HLA-GP17693 338 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 NFYAP23511 347 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-208ENST00000397204 CRHBPP24387 322 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 EIF4EBP1Q13541 118 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-208ENST00000397204 OR2B11Q5JQS5 317 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 HACD4Q5VWC8 232 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 LGALS9CQ6DKI2 356 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 PLET1Q6UQ28 207 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms