RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 SNAI3Q3KNW1 292 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 KCNS1Q96KK3 526 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 SRXN1Q9BYN0 137 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 IGKV3D-20A0A0C4DH25 116 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 EPOPA6NHQ4 379 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 RRHO14718 337 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 SAA1P0DJI8 122 aaPredicted RBP6.11□□□□□ -1.43
UPF2-203ENST00000397053 DSCR9P59020 149 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 PMCHL1Q16048 86 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 OR5AN1Q8NGI8 311 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 TBL2Q9Y4P3 447 aaKnown RBP6.11□□□□□ -1.43
UPF2-203ENST00000397053 SSC5DA1L4H1 1573 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 SHROOM3Q8TF72 1996 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 TRAV40A0A0B4J280 105 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 CD7P09564 240 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 RNASE4P34096 147 aaKnown RBP6.11□□□□□ -1.43
UPF2-203ENST00000397053 NANOS3P60323 173 aaKnown RBP6.11□□□□□ -1.43
UPF2-203ENST00000397053 UBE2V2Q15819 145 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 FOXB2Q5VYV0 432 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 CBLN2Q8IUK8 224 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 SPACA3Q8IXA5 215 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 SMDT1Q9H4I9 107 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 PILRAQ9UKJ1 303 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 KLHDC2Q9Y2U9 406 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 MSGN1A6NI15 193 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 STAG3L3P0CL85 134 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 ARL14EPLP0DKL9 152 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 PAX1P15863 534 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 CMC4P56277 68 aaPredicted RBP6.11□□□□□ -1.43
UPF2-203ENST00000397053 SLC25A34Q6PIV7 304 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 SCGB3A1Q96QR1 104 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 GPR132Q9UNW8 380 aa6.11□□□□□ -1.43
UPF2-203ENST00000397053 NWD2Q9ULI1 1742 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 TM4SF5O14894 197 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 FOLR2P14207 255 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 FSTP19883 344 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 TDGF1P3P51864 188 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 RPL39P5Q59GN2 51 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 MUC21Q5SSG8 566 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 FAM166AQ6J272 317 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 TEX45Q8NA69 505 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 C18orf15Q96N68 181 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 IFT22Q9H7X7 185 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 KLK13Q9UKR3 277 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 GTF3C1Q12789 2109 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 AKAP12Q02952 1782 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 KLF4O43474 513 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 CD33P20138 364 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 KIAA1644Q3SXP7 199 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 C10orf126Q8N4M7 172 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 DRAM1Q8N682 238 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 BEND2Q8NDZ0 799 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 PHLDA1Q8WV24 401 aaPredicted RBP6.1□□□□□ -1.43
UPF2-203ENST00000397053 GLMPQ8WWB7 406 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 LHFPL6Q9Y693 200 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 THBDP07204 575 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 CELA3AP09093 270 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 SRIP30626 198 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 RNASEH2CQ8TDP1 164 aaKnown RBP6.1□□□□□ -1.43
UPF2-203ENST00000397053 TDRD6O60522 2096 aaKnown RBP6.1□□□□□ -1.43
UPF2-203ENST00000397053 SHPRHQ149N8 1683 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 A0A1W2PR77 199 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 E9PLN8 166 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 TIAF1O95411 115 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 RFPL3SP0C7P2 107 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 FAM71F2Q6NXP2 309 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 CYP2G1PQ6ZSU1 146 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 TMEM86BQ8N661 226 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 OR10S1Q8NGN2 331 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 VKORC1Q9BQB6 163 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 PARLQ9H300 379 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 CRIM1Q9NZV1 1036 aa6.1□□□□□ -1.43
UPF2-203ENST00000397053 C1QL1O75973 258 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 WNT2P09544 360 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 CXCL3P19876 107 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 ERVK11-1P61568 191 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 ASCL4Q6XD76 172 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 TMEM136Q6ZRR5 245 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 LRTM2Q8N967 370 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 VCX2Q9H322 139 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 MYH4Q9Y623 1939 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 IGHV2OR16-5A0A0B4J2B6 119 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 MUC21A0A0G2JKD1 596 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 MUC21A0A140T8X8 626 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 GRIFINA4D1Z8 144 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 NBR2O15453 112 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 SRD5A1P18405 259 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 SRSF7Q16629 238 aaKnown RBP eCLIP6.09□□□□□ -1.43
UPF2-203ENST00000397053 PRSS53Q2L4Q9 553 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 HIST1H2BAQ96A08 127 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 ZNF414Q96IQ9 312 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 IFI27L2Q9H2X8 130 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 CST9LQ9H4G1 147 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 JPT2Q9H910 190 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 IGF2P01344 180 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 ERGP11308 486 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 EGR1P18146 543 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 FOXA3P55318 350 aaPredicted RBP6.09□□□□□ -1.43
UPF2-203ENST00000397053 HBBP68871 147 aa6.09□□□□□ -1.43
UPF2-203ENST00000397053 STPG2Q8N412 459 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms