RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ASCL2Q99929 193 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 M0R1W7 72 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 SIGLEC5O15389 551 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 AGAP20933 346 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 UQCRFS1P47985 274 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 HBBP68871 147 aa13.18□□□□□ -0.3
GNE-202ENST00000396594 DIRC3C9JPN6 131 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 M0R3E3 92 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 ASIPP42127 132 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 SFRP2Q96HF1 295 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 PTPRFP10586 1907 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 LMX1BO60663 402 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 ATP5LO75964 103 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 CTSBP07858 339 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 FOLR2P14207 255 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 THSD7BQ9C0I4 1608 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 J3QRE1 110 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 SCO1O75880 301 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 WFDC3Q8IUB2 231 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 CSN3P07498 182 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 CACNG7P62955 275 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 LAIR2Q6ISS4 152 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 SPACA3Q8IXA5 215 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 NCOR1P1Q9H4R4 102 aa13.17□□□□□ -0.3
GNE-202ENST00000396594 GON4LQ3T8J9 2241 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 C15orf61A6NNL5 157 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 ITGB1BP1O14713 200 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 ZNF137PP52743 207 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 FAM27E3Q08E93 113 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 FOXL2NBQ6ZUU3 175 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 FBXL7Q9UJT9 491 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 CARHSP1Q9Y2V2 147 aaKnown RBP13.16□□□□□ -0.3
GNE-202ENST00000396594 C1QTNF9BB2RNN3 333 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 NDUFS8O00217 210 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 RUNX1Q01196 453 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 NPIPB3Q92617 1050 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 MBD3L4A6NDZ8 208 aaPredicted RBP13.16□□□□□ -0.3
GNE-202ENST00000396594 MBD3L3A6NE82 208 aaPredicted RBP13.16□□□□□ -0.3
GNE-202ENST00000396594 MBD3L5A6NJ08 208 aaPredicted RBP13.16□□□□□ -0.3
GNE-202ENST00000396594 ATP1A1-AS1Q5TC04 95 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 ZNF600Q6ZNG1 722 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 Q6ZS49 121 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 MBD3L2Q8NHZ7 208 aaPredicted RBP13.16□□□□□ -0.3
GNE-202ENST00000396594 LINC01560Q8TB33 94 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 IL4P05112 153 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 EFNA4P52798 201 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 PLXNA3P51805 1871 aa13.16□□□□□ -0.3
GNE-202ENST00000396594 ZNF362Q5T0B9 420 aaPredicted RBP13.15□□□□□ -0.3
GNE-202ENST00000396594 C18orf12Q96KH6 178 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 TBX6O95947 436 aaPredicted RBP13.15□□□□□ -0.3
GNE-202ENST00000396594 IFITM3Q01628 133 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 OR1N2Q8NGR9 330 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 OR1P1Q8NH06 330 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 RGP1Q92546 391 aaPredicted RBP13.15□□□□□ -0.3
GNE-202ENST00000396594 TMEM101Q96IK0 257 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 ZNF646O15015 1829 aaPredicted RBP13.15□□□□□ -0.3
GNE-202ENST00000396594 ANK1P16157 1881 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 SLC25A16P16260 332 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 SSTR5P35346 364 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 TCF23Q7RTU1 214 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 TP53RKQ96S44 253 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 TBL2Q9Y4P3 447 aaKnown RBP13.15□□□□□ -0.3
GNE-202ENST00000396594 MEX3AA1L020 520 aaKnown RBP13.15□□□□□ -0.3
GNE-202ENST00000396594 NPFFO15130 113 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 GATA3P23771 443 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 CEBPDP49716 269 aaPredicted RBP13.15□□□□□ -0.3
GNE-202ENST00000396594 LINC00305Q7Z4B0 112 aa13.15□□□□□ -0.3
GNE-202ENST00000396594 LEPROTL1O95214 131 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 RAB37Q96AX2 223 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 PRDM6Q9NQX0 595 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 NBEAP1P0C6P0 100 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 DTX1Q86Y01 620 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 MDS2Q8NDY4 140 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 RPRMQ9NS64 109 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 IGHV3-72A0A0B4J1Y9 119 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 HLA-DRB1P01911 266 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 RPLP1P05386 114 aaKnown RBP13.14□□□□□ -0.31
GNE-202ENST00000396594 TBR1Q16650 682 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 SOSTQ9BQB4 213 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 SDK1Q7Z5N4 2213 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 WDR82Q6UXN9 313 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 OR13A1Q8NGR1 328 aa13.14□□□□□ -0.31
GNE-202ENST00000396594 MRPL18Q9H0U6 180 aaKnown RBP13.14□□□□□ -0.31
GNE-202ENST00000396594 FNDC10F2Z333 226 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 NUDT3O95989 172 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 C1QCP02747 245 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 OR8A1Q8NGG7 326 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 CELA3AP09093 270 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 PRCDQ00LT1 54 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 SDF2L1Q9HCN8 221 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 SRRM5B3KS81 715 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 LGALS3P17931 250 aaKnown RBP13.13□□□□□ -0.31
GNE-202ENST00000396594 COL5A1-AS1Q5SY13 56 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 GLRX5Q86SX6 157 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 IMMP2LQ96T52 175 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 TUBA4BQ9H853 241 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 DCAF16Q9NXF7 216 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 IL36BQ9NZH7 164 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 UQCR10Q9UDW1 63 aa13.13□□□□□ -0.31
GNE-202ENST00000396594 A0A0B4J293 547 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms