RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 BTNL8Q6UX41 500 aa13.04□□□□□ -0.32
EXOSC3-202ENST00000396521 ZNF66Q6ZN08 573 aa13.04□□□□□ -0.32
EXOSC3-202ENST00000396521 OR4A5Q8NH83 315 aa13.04□□□□□ -0.32
EXOSC3-202ENST00000396521 MAFIPQ8WZ33 124 aa13.04□□□□□ -0.32
EXOSC3-202ENST00000396521 SRSF8Q9BRL6 282 aaKnown RBP13.04□□□□□ -0.32
EXOSC3-202ENST00000396521 A0A075B6Q4 140 aa13.03□□□□□ -0.32
EXOSC3-202ENST00000396521 IFITM5A6NNB3 132 aa13.03□□□□□ -0.32
EXOSC3-202ENST00000396521 EDN2P20800 178 aa13.03□□□□□ -0.32
EXOSC3-202ENST00000396521 FABP5Q01469 135 aa13.03□□□□□ -0.32
EXOSC3-202ENST00000396521 LGALS9CQ6DKI2 356 aa13.03□□□□□ -0.32
EXOSC3-202ENST00000396521 VKORC1L1Q8N0U8 176 aa13.03□□□□□ -0.32
EXOSC3-202ENST00000396521 RNF183Q96D59 192 aa13.03□□□□□ -0.32
EXOSC3-202ENST00000396521 IGLV11-55A0A075B6I3 123 aa13.02□□□□□ -0.33
EXOSC3-202ENST00000396521 TSPAN4O14817 238 aa13.02□□□□□ -0.33
EXOSC3-202ENST00000396521 FGF2P09038 288 aa13.02□□□□□ -0.33
EXOSC3-202ENST00000396521 RPL30P62888 115 aaKnown RBP13.02□□□□□ -0.33
EXOSC3-202ENST00000396521 MSMO1Q15800 293 aa13.02□□□□□ -0.33
EXOSC3-202ENST00000396521 ZNF585BQ52M93 769 aa13.02□□□□□ -0.33
EXOSC3-202ENST00000396521 CNIH2Q6PI25 160 aa13.02□□□□□ -0.33
EXOSC3-202ENST00000396521 PLET1Q6UQ28 207 aa13.02□□□□□ -0.33
EXOSC3-202ENST00000396521 TCTEX1D2Q8WW35 142 aa13.02□□□□□ -0.33
EXOSC3-202ENST00000396521 ATP6V0BQ99437 205 aa13.02□□□□□ -0.33
EXOSC3-202ENST00000396521 NDUFB11Q9NX14 153 aa13.02□□□□□ -0.33
EXOSC3-202ENST00000396521 E7EUB6 86 aa13.01□□□□□ -0.33
EXOSC3-202ENST00000396521 SCGNO76038 276 aa13.01□□□□□ -0.33
EXOSC3-202ENST00000396521 IGHV3-23P01764 117 aa13.01□□□□□ -0.33
EXOSC3-202ENST00000396521 AREGP15514 252 aa13.01□□□□□ -0.33
EXOSC3-202ENST00000396521 HLA-GP17693 338 aa13.01□□□□□ -0.33
EXOSC3-202ENST00000396521 PTBP1P26599 531 aaKnown RBP eCLIP13.01□□□□□ -0.335e-6■■□□□ 13.8
EXOSC3-202ENST00000396521 PLA2G7Q13093 441 aa13.01□□□□□ -0.33
EXOSC3-202ENST00000396521 C6orf62Q9GZU0 229 aaPredicted RBP13.01□□□□□ -0.33
EXOSC3-202ENST00000396521 BET1LQ9NYM9 111 aa13.01□□□□□ -0.33
EXOSC3-202ENST00000396521 IGKV1D-8A0A087WSZ0 117 aa13□□□□□ -0.33
EXOSC3-202ENST00000396521 OR4C46A6NHA9 309 aa13□□□□□ -0.33
EXOSC3-202ENST00000396521 IGLV2-14P01704 120 aa13□□□□□ -0.33
EXOSC3-202ENST00000396521 CMC4P56277 68 aaPredicted RBP13□□□□□ -0.33
EXOSC3-202ENST00000396521 DEFB135Q30KP9 77 aa13□□□□□ -0.33
EXOSC3-202ENST00000396521 CDNFQ49AH0 187 aa13□□□□□ -0.33
EXOSC3-202ENST00000396521 OR2B11Q5JQS5 317 aa13□□□□□ -0.33
EXOSC3-202ENST00000396521 HACD4Q5VWC8 232 aa13□□□□□ -0.33
EXOSC3-202ENST00000396521 UNQ9165/PRO28630Q6UXU0 137 aa13□□□□□ -0.33
EXOSC3-202ENST00000396521 MFSD4AQ8N468 514 aa13□□□□□ -0.33
EXOSC3-202ENST00000396521 ZNF502Q8TBZ5 544 aa13□□□□□ -0.33
EXOSC3-202ENST00000396521 VN1R17PQ8TDU5 208 aa13□□□□□ -0.33
EXOSC3-202ENST00000396521 ZNF436Q9C0F3 470 aaPredicted RBP13□□□□□ -0.33
EXOSC3-202ENST00000396521 DAZ1Q9NQZ3 744 aaKnown RBP13□□□□□ -0.33
EXOSC3-202ENST00000396521 SPATA2Q9UM82 520 aa13□□□□□ -0.33
EXOSC3-202ENST00000396521 FRAS1Q86XX4 4008 aa12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 A0A1B0GW64 132 aa12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 J3QRK9 145 aa12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 RBFOX2O43251 390 aaKnown RBP eCLIP12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 NFYAP23511 347 aaPredicted RBP12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 MYL9P24844 172 aa12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 TCTAP57738 103 aa12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 EIF4EBP1Q13541 118 aaPredicted RBP12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 THOC7Q6I9Y2 204 aaKnown RBP12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 HSD17B13Q7Z5P4 300 aaPredicted RBP12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 ZBTB34Q8NCN2 500 aa12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 PHLDA1Q8WV24 401 aaPredicted RBP12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 GALNT14Q96FL9 552 aa12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 MFFQ9GZY8 342 aa12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 ATG5Q9H1Y0 275 aa12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 S4R3C0 116 aa12.99□□□□□ -0.33
EXOSC3-202ENST00000396521 MFSD2BA6NFX1 497 aa12.98□□□□□ -0.33
EXOSC3-202ENST00000396521 RAB3BP20337 219 aa12.98□□□□□ -0.33
EXOSC3-202ENST00000396521 GPR183P32249 361 aa12.98□□□□□ -0.33
EXOSC3-202ENST00000396521 EWSR1Q01844 656 aaKnown RBP eCLIP12.98□□□□□ -0.33
EXOSC3-202ENST00000396521 SPSB3Q6PJ21 355 aa12.98□□□□□ -0.33
EXOSC3-202ENST00000396521 TMEM190Q8WZ59 177 aa12.98□□□□□ -0.33
EXOSC3-202ENST00000396521 COMMD5Q9GZQ3 224 aa12.98□□□□□ -0.33
EXOSC3-202ENST00000396521 TAS2R8Q9NYW2 309 aa12.98□□□□□ -0.33
EXOSC3-202ENST00000396521 TGOLN2O43493 480 aa12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 TAS2R31P59538 309 aa12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 OR2B8PP59922 312 aa12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 C19orf35Q6ZS72 473 aa12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 SSX9Q7RTT3 188 aa12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 RPP25LQ8N5L8 163 aaKnown RBP12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 CD300LFQ8TDQ1 290 aa12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 GATAD1Q8WUU5 269 aa12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 BSCL2Q96G97 398 aaPredicted RBP12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 MRPS26Q9BYN8 205 aaKnown RBP12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 MAP6D1Q9H9H5 199 aa12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 HRASLSQ9HDD0 168 aa12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 ANXA10Q9UJ72 324 aa12.97□□□□□ -0.33
EXOSC3-202ENST00000396521 IGKV1D-13A0A0B4J2D9 117 aa12.96□□□□□ -0.33
EXOSC3-202ENST00000396521 K7EMT4 169 aa12.96□□□□□ -0.33
EXOSC3-202ENST00000396521 SMIM18P0DKX4 95 aa12.96□□□□□ -0.33
EXOSC3-202ENST00000396521 IGKV1-13P0DP09 117 aa12.96□□□□□ -0.33
EXOSC3-202ENST00000396521 OR10A3P58181 314 aa12.96□□□□□ -0.33
EXOSC3-202ENST00000396521 BRWD1-AS2P59051 145 aa12.96□□□□□ -0.33
EXOSC3-202ENST00000396521 ARPC4P59998 168 aa12.96□□□□□ -0.33
EXOSC3-202ENST00000396521 POU2AF1Q16633 256 aa12.96□□□□□ -0.33
EXOSC3-202ENST00000396521 TIMM50Q3ZCQ8 353 aa12.96□□□□□ -0.33
EXOSC3-202ENST00000396521 SELENOKQ9Y6D0 94 aa12.96□□□□□ -0.33
EXOSC3-202ENST00000396521 KMT2AQ03164 3969 aa12.96□□□□□ -0.33
EXOSC3-202ENST00000396521 TRDV1A0A1B0GX56 115 aa12.95□□□□□ -0.34
EXOSC3-202ENST00000396521 IGLC7A0M8Q6 106 aa12.95□□□□□ -0.34
EXOSC3-202ENST00000396521 NDUFA4O00483 81 aa12.95□□□□□ -0.34
EXOSC3-202ENST00000396521 HPRT1P00492 218 aa12.95□□□□□ -0.34
EXOSC3-202ENST00000396521 IFNA4P05014 189 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms