RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 MBD3L3A6NE82 208 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-202ENST00000396263 MBD3L5A6NJ08 208 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-202ENST00000396263 PRSS46E5RG02 174 aa13.21□□□□□ -0.29
CCHCR1-202ENST00000396263 TMPRSS3P57727 454 aa13.21□□□□□ -0.29
CCHCR1-202ENST00000396263 MBD3L2Q8NHZ7 208 aaPredicted RBP13.21□□□□□ -0.29
CCHCR1-202ENST00000396263 TET2Q6N021 2002 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 ITGB1BP1O14713 200 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 PDE6DO43924 150 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 SCGB1D1O95968 90 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 IGHV3-13P01766 116 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 CRYABP02511 175 aaKnown RBP13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 NPPCP23582 126 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 KIR2DS2P43631 304 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 ZNF134P52741 427 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 ERVK-16P61578 105 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 RELBQ01201 579 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 RPL39P5Q59GN2 51 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 SEM1Q6ZVN7 128 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 TMEM37Q8WXS4 190 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 TMEM18Q96B42 140 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 PLPPR2Q96GM1 343 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 IRF2P14316 349 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 OPRK1P41145 380 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 TREML4Q6UXN2 200 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 ZNF705AQ6ZN79 300 aaPredicted RBP13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 OR2V2Q96R30 315 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 NCOR1P1Q9H4R4 102 aa13.2□□□□□ -0.3
CCHCR1-202ENST00000396263 IGHV3OR15-7A0A075B7D8 119 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 PPP5D1E7EU14 171 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 LHBP01229 141 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 GCSAMLQ5JQS6 135 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 DDB2Q92466 427 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 S1PR3Q99500 378 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 HEYLQ9NQ87 328 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 FUT9Q9Y231 359 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 ACACAQ13085 2346 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 ANKRD11Q6UB99 2663 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 TRAV38-1A0A0B4J264 116 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 RRHO14718 337 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 CGB3P0DN86 165 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 CGB7P0DN87 165 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 SRP14P37108 136 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 FAM3BP58499 235 aaPredicted RBP13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 ZNRF1Q8ND25 227 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 TMEM170AQ8WVE7 144 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 ELOVL1Q9BW60 279 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 LPAR2Q9HBW0 351 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 KCNIP2Q9NS61 270 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 TMEM140Q9NV12 185 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 FKBP11Q9NYL4 201 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 CALYQ9NYX4 217 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 NBEAQ8NFP9 2946 aa13.19□□□□□ -0.3
CCHCR1-202ENST00000396263 DSCAML1Q8TD84 2053 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 TRGV8A0A0C4DH27 118 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 TMPRSS2O15393 492 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 GGCTO75223 188 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 EDDM3BP56851 147 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 SPRNQ5BIV9 151 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 VKORC1L1Q8N0U8 176 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 ACY3Q96HD9 319 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 PCGF1Q9BSM1 259 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 FAM234AQ9H0X4 552 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 A0A1W2PPV4 95 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 GLRXP35754 106 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 RAB7AP51149 207 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 ZNF83P51522 516 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 TIMM23BQ5SRD1 257 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 MOGAT3Q86VF5 341 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 MGST2Q99735 147 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 SPTBN4Q9H254 2564 aa13.18□□□□□ -0.3
CCHCR1-202ENST00000396263 TRAV3A0A0B4J244 114 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 DLL1O00548 723 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 TYMSP04818 313 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 CD99P14209 185 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 KLF3P57682 345 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 GNB1P62873 340 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 C3orf36Q3SXR2 165 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 OR4S2Q8NH73 311 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 TXNDC17Q9BRA2 123 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 MS4A5Q9H3V2 200 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 TCF19Q9Y242 345 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 SVILO95425 2214 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 F6UZH7 168 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 C17orf58Q2M2W7 97 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 LINC01551Q86U37 167 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 GBGT1Q8N5D6 347 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 OR2T10Q8NGZ9 312 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 GGTLC1Q9BX51 225 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 RAB9BQ9NP90 201 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 CADP27708 2225 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 DSCAMO60469 2012 aa13.17□□□□□ -0.3
CCHCR1-202ENST00000396263 ATMQ13315 3056 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 A0A1B0GUS0 222 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 A0A1W2PPQ1 181 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 C15orf61A6NNL5 157 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 M0QZK8 103 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 M0R1B8 84 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 STAG3L2P0CL84 134 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 STAG3L3P0CL85 134 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms