RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ZNF318Q5VUA4 2279 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 SUMO1P63165 101 aaKnown RBP11.89□□□□□ -0.51
CLIP2-203ENST00000395060 ARG2P78540 354 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 HES3Q5TGS1 186 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 MOB1BQ7L9L4 216 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 COQ2Q96H96 371 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 TPRP12270 2363 aaKnown RBP11.89□□□□□ -0.51
CLIP2-203ENST00000395060 YPEL1O60688 119 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 GNG10P50151 68 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 FOXF2Q12947 444 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 DCAF12Q5T6F0 453 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 LINC00596Q86U02 117 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 YPEL2Q96QA6 119 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 HEATR1Q9H583 2144 aaKnown RBP11.89□□□□□ -0.51
CLIP2-203ENST00000395060 SRIP30626 198 aa11.88□□□□□ -0.51
CLIP2-203ENST00000395060 MRPS11P82912 194 aaKnown RBP11.88□□□□□ -0.51
CLIP2-203ENST00000395060 TEX43Q6ZNM6 134 aa11.88□□□□□ -0.51
CLIP2-203ENST00000395060 GGTLC1Q9BX51 225 aa11.88□□□□□ -0.51
CLIP2-203ENST00000395060 PARD6GQ9BYG4 376 aaPredicted RBP11.88□□□□□ -0.51
CLIP2-203ENST00000395060 NRN1Q9NPD7 142 aa11.88□□□□□ -0.51
CLIP2-203ENST00000395060 MBNL3Q9NUK0 354 aaKnown RBP11.88□□□□□ -0.51
CLIP2-203ENST00000395060 POLDIP2Q9Y2S7 368 aa11.88□□□□□ -0.51
CLIP2-203ENST00000395060 PIGBOS1A0A0B4J2F0 54 aa11.88□□□□□ -0.51
CLIP2-203ENST00000395060 TDGF1P13385 188 aa11.88□□□□□ -0.51
CLIP2-203ENST00000395060 GPR12P47775 334 aa11.88□□□□□ -0.51
CLIP2-203ENST00000395060 MIR17HGQ75NE6 70 aa11.88□□□□□ -0.51
CLIP2-203ENST00000395060 CT55Q8WUE5 264 aa11.88□□□□□ -0.51
CLIP2-203ENST00000395060 HSD17B10Q99714 261 aaKnown RBP11.88□□□□□ -0.51
CLIP2-203ENST00000395060 ZNF586Q9NXT0 402 aa11.88□□□□□ -0.51
CLIP2-203ENST00000395060 IL36BQ9NZH7 164 aa11.88□□□□□ -0.51
CLIP2-203ENST00000395060 MRPS18CQ9Y3D5 142 aaKnown RBP11.88□□□□□ -0.51
CLIP2-203ENST00000395060 TMPRSS2O15393 492 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 PRB4P10163 310 aaPredicted RBP11.87□□□□□ -0.51
CLIP2-203ENST00000395060 GCHFRP30047 84 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 COMPP49747 757 aaPredicted RBP11.87□□□□□ -0.51
CLIP2-203ENST00000395060 PSG5Q15238 335 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 RPEL1Q2QD12 228 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 ABHD17BQ5VST6 288 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 UNQ5815/PRO19632Q6UWF5 114 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 TMEM251Q8N6I4 163 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 ST6GALNAC6Q969X2 333 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 SGK494Q96LW2 274 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 TTTY12Q9BZ98 90 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 PKIBQ9C010 78 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 TIMM8BQ9Y5J9 83 aaPredicted RBP11.87□□□□□ -0.51
CLIP2-203ENST00000395060 DMXL2Q8TDJ6 3036 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 M0QZK8 103 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 CENPWQ5EE01 88 aa11.87□□□□□ -0.51
CLIP2-203ENST00000395060 IGHV3OR15-7A0A075B7D8 119 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 NPIPB11E5RHQ5 1161 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 RAB29O14966 203 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 OR7C2O60412 319 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 IL6RP08887 468 aaPredicted RBP11.86□□□□□ -0.51
CLIP2-203ENST00000395060 UBE2NP61088 152 aaKnown RBP11.86□□□□□ -0.51
CLIP2-203ENST00000395060 RANP62826 216 aaKnown RBP11.86□□□□□ -0.51
CLIP2-203ENST00000395060 OR1C1Q15619 314 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 STPG3Q8N7X2 389 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 Q8TCH9 128 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 LINC00479Q96M42 142 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 CBY1Q9Y3M2 126 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 WIPI2Q9Y4P8 454 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 A8MXE2 369 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 CXorf1O96002 111 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 IGHV3-48P01763 117 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 OR5G3P0C626 314 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 P0C879 139 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 IGFBP2P18065 325 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 HNRNPA3P51991 378 aaKnown RBP11.86□□□□□ -0.51
CLIP2-203ENST00000395060 YPEL3P61236 119 aaPredicted RBP11.86□□□□□ -0.51
CLIP2-203ENST00000395060 PAFAH1B2P68402 229 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 RNF151Q2KHN1 245 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 TBC1D28Q2M2D7 210 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 COL5A1-AS1Q5SY13 56 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 TMEM45BQ96B21 275 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 PROP1O75360 226 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 STAG3L2P0CL84 134 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 STAG3L3P0CL85 134 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 EFNB3Q15768 340 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 MLANAQ16655 118 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 LHFPL4Q7Z7J7 247 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 EAF1Q96JC9 268 aaPredicted RBP11.86□□□□□ -0.51
CLIP2-203ENST00000395060 C20orf144Q9BQM9 153 aa11.86□□□□□ -0.51
CLIP2-203ENST00000395060 GPR6P46095 362 aaPredicted RBP11.85□□□□□ -0.51
CLIP2-203ENST00000395060 GNG4P50150 75 aa11.85□□□□□ -0.51
CLIP2-203ENST00000395060 PTTG1IPP53801 180 aa11.85□□□□□ -0.51
CLIP2-203ENST00000395060 PRR27Q6MZM9 219 aa11.85□□□□□ -0.51
CLIP2-203ENST00000395060 SELENOKQ9Y6D0 94 aa11.85□□□□□ -0.51
CLIP2-203ENST00000395060 OOEPA6NGQ2 149 aa11.85□□□□□ -0.51
CLIP2-203ENST00000395060 SS18L1O75177 396 aaPredicted RBP11.85□□□□□ -0.51
CLIP2-203ENST00000395060 GPX1P07203 203 aa11.85□□□□□ -0.51
CLIP2-203ENST00000395060 LGALS4P56470 323 aa11.85□□□□□ -0.51
CLIP2-203ENST00000395060 ERVK11-1P61568 191 aa11.85□□□□□ -0.51
CLIP2-203ENST00000395060 SLC35E1Q96K37 410 aa11.85□□□□□ -0.51
CLIP2-203ENST00000395060 TAAR6Q96RI8 345 aa11.85□□□□□ -0.51
CLIP2-203ENST00000395060 IGKV3D-15A0A087WSY6 115 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 SMPD2O60906 423 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 CD99P14209 185 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 RELQ04864 619 aaPredicted RBP11.84□□□□□ -0.51
CLIP2-203ENST00000395060 Q56UQ5 140 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 C6orf15Q6UXA7 325 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms