RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 NIT1Q86X76 327 aa10.43□□□□□ -0.74
SIN3A-202ENST00000394947 LNP1A1A4G5 178 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 IGHV3-53P01767 116 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 FGF5P12034 268 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 NUTF2P61970 127 aaKnown RBP10.42□□□□□ -0.74
SIN3A-202ENST00000394947 WDR34Q96EX3 536 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 ATP5LO75964 103 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 CXCL10P02778 98 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 MT-ND6P03923 174 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 CTSBP07858 339 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 ATP5G3P48201 142 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 ZNF660Q6AZW8 331 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-202ENST00000394947 TTC9CQ8N5M4 171 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 FAM206AQ9NX38 181 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 CD8AP01732 235 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 IL6RP08887 468 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-202ENST00000394947 Q5BKY6 102 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 S100A7L2Q5SY68 101 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 CLDND2Q8NHS1 167 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 ARHGEF17Q96PE2 2063 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-202ENST00000394947 C19orf67A6NJJ6 358 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 RPL34P49207 117 aaKnown RBP10.42□□□□□ -0.74
SIN3A-202ENST00000394947 LRTM2Q8N967 370 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 SDHCQ99643 169 aaPredicted RBP10.42□□□□□ -0.74
SIN3A-202ENST00000394947 RNF115Q9Y4L5 304 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 A0A1W2PPV9 198 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 OR2K2Q8NGT1 345 aa10.42□□□□□ -0.74
SIN3A-202ENST00000394947 RNASE7Q9H1E1 156 aaKnown RBP10.42□□□□□ -0.74
SIN3A-202ENST00000394947 IGLV3-16A0A075B6K0 115 aa10.41□□□□□ -0.74
SIN3A-202ENST00000394947 TMEM250H0YL14 139 aa10.41□□□□□ -0.74
SIN3A-202ENST00000394947 CDKN1AP38936 164 aa10.41□□□□□ -0.74
SIN3A-202ENST00000394947 TRGV4A0A0C4DH28 118 aa10.41□□□□□ -0.74
SIN3A-202ENST00000394947 ZP1P60852 638 aa10.41□□□□□ -0.74
SIN3A-202ENST00000394947 LCNL1Q6ZST4 164 aa10.41□□□□□ -0.74
SIN3A-202ENST00000394947 OR9G4Q8NGQ1 327 aa10.41□□□□□ -0.74
SIN3A-202ENST00000394947 TCF19Q9Y242 345 aa10.41□□□□□ -0.74
SIN3A-202ENST00000394947 LDLRAD2Q5SZI1 272 aa10.41□□□□□ -0.74
SIN3A-202ENST00000394947 FGF11Q92914 225 aa10.41□□□□□ -0.74
SIN3A-202ENST00000394947 SDF2L1Q9HCN8 221 aa10.41□□□□□ -0.74
SIN3A-202ENST00000394947 TRAV30A0A087WSZ9 112 aa10.4□□□□□ -0.74
SIN3A-202ENST00000394947 HMGA2P52926 109 aa10.4□□□□□ -0.74
SIN3A-202ENST00000394947 HSPE1P61604 102 aaKnown RBP10.4□□□□□ -0.74
SIN3A-202ENST00000394947 SRSF6Q13247 344 aaKnown RBP10.4□□□□□ -0.74
SIN3A-202ENST00000394947 MRAPQ8TCY5 172 aa10.4□□□□□ -0.74
SIN3A-202ENST00000394947 MARS2Q96GW9 593 aaKnown RBP10.4□□□□□ -0.74
SIN3A-202ENST00000394947 INS-IGF2F8WCM5 200 aa10.4□□□□□ -0.74
SIN3A-202ENST00000394947 INSP01308 110 aa10.4□□□□□ -0.74
SIN3A-202ENST00000394947 LAMB1P07942 1786 aa10.4□□□□□ -0.74
SIN3A-202ENST00000394947 C7orf66A4D0T2 115 aa10.4□□□□□ -0.74
SIN3A-202ENST00000394947 DMRTC2Q8IXT2 367 aaPredicted RBP10.4□□□□□ -0.74
SIN3A-202ENST00000394947 TMEM174Q8WUU8 243 aa10.4□□□□□ -0.74
SIN3A-202ENST00000394947 MIR17HGQ75NE6 70 aa10.4□□□□□ -0.74
SIN3A-202ENST00000394947 CXorf51AA0A1B0GTR3 108 aa10.4□□□□□ -0.75
SIN3A-202ENST00000394947 LIPFP07098 398 aa10.4□□□□□ -0.75
SIN3A-202ENST00000394947 ZNF345Q14585 488 aa10.4□□□□□ -0.75
SIN3A-202ENST00000394947 ZNF562Q6V9R5 426 aa10.4□□□□□ -0.75
SIN3A-202ENST00000394947 WFDC6Q9BQY6 131 aa10.4□□□□□ -0.75
SIN3A-202ENST00000394947 C5orf66Q9H5L9 145 aa10.4□□□□□ -0.75
SIN3A-202ENST00000394947 DOCK5Q9H7D0 1870 aa10.4□□□□□ -0.75
SIN3A-202ENST00000394947 FOXS1O43638 330 aa10.4□□□□□ -0.75
SIN3A-202ENST00000394947 COX11Q9Y6N1 276 aa10.4□□□□□ -0.75
SIN3A-202ENST00000394947 FAM27E3Q08E93 113 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 SRSF7Q16629 238 aaKnown RBP eCLIP10.39□□□□□ -0.75
SIN3A-202ENST00000394947 CLPPQ16740 277 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-202ENST00000394947 PPP1R27Q86WC6 154 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 DRAM1Q8N682 238 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 SLC25A2Q9BXI2 301 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 ALX4Q9H161 411 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-202ENST00000394947 VCX2Q9H322 139 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 SCN1AP35498 2009 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 PGPEP1LA6NFU8 196 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 CD28P10747 220 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 RPL35AP18077 110 aaKnown RBP10.39□□□□□ -0.75
SIN3A-202ENST00000394947 ISXQ2M1V0 245 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 SLC22A18ASQ8N1D0 253 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 ITGBL1O95965 494 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-202ENST00000394947 COLCA1Q6ZS62 124 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 LAMTOR3Q9UHA4 124 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 PSCAO43653 123 aa10.39□□□□□ -0.75
SIN3A-202ENST00000394947 TBR1Q16650 682 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 TEX29Q8N6K0 151 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 COQ2Q96H96 371 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.38□□□□□ -0.75
SIN3A-202ENST00000394947 GCM2O75603 506 aaPredicted RBP10.38□□□□□ -0.75
SIN3A-202ENST00000394947 EGR4Q05215 589 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 SUMO4Q6EEV6 95 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 FER1L6-AS1Q8NA97 138 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 ASCL2Q99929 193 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 Q9H3A6 140 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 ADARB2-AS1A8MUL3 147 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 PRR33A8MZF0 331 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 ADMP35318 185 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 CHCHD5Q9BSY4 110 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 MYO16Q9Y6X6 1858 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 MYO5AQ9Y4I1 1855 aaKnown RBP10.38□□□□□ -0.75
SIN3A-202ENST00000394947 NMBP08949 121 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 H2BFSP57053 126 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 LOXL4Q96JB6 756 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 C7orf69Q9H7B7 122 aa10.38□□□□□ -0.75
SIN3A-202ENST00000394947 ELOVL5Q9NYP7 299 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms