RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 RPL39P5Q59GN2 51 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 VWA1Q6PCB0 445 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 TCF23Q7RTU1 214 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 OR52E5Q8NH55 327 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 C1orf159Q96HA4 380 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 GNG12Q9UBI6 72 aa15.16■□□□□ 0.02
PCDHA1-202ENST00000394633 HEATR1Q9H583 2144 aaKnown RBP15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 AQP7O14520 342 aa15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 CXorf1O96002 111 aa15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 GCH1P30793 250 aa15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 HOXC12P31275 282 aa15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 IQCJQ1A5X6 159 aa15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 TXNDC17Q9BRA2 123 aa15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 TP53TG5Q9Y2B4 290 aa15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 TLN1Q9Y490 2541 aaKnown RBP15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 IGHV3-13P01766 116 aa15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 IGHV3-7P01780 117 aa15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 HNF1AP20823 631 aa15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 ZNF718Q3SXZ3 478 aa15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 JPT1Q9UK76 154 aa15.15■□□□□ 0.02
PCDHA1-202ENST00000394633 CACNA1AO00555 2505 aa15.14■□□□□ 0.01
PCDHA1-202ENST00000394633 IGKV1D-17A0A075B6S4 117 aa15.14■□□□□ 0.01
PCDHA1-202ENST00000394633 ADMP35318 185 aa15.14■□□□□ 0.01
PCDHA1-202ENST00000394633 KIR2DL2P43627 348 aaPredicted RBP15.14■□□□□ 0.01
PCDHA1-202ENST00000394633 ZNF134P52741 427 aa15.14■□□□□ 0.01
PCDHA1-202ENST00000394633 ERVK-16P61578 105 aa15.14■□□□□ 0.01
PCDHA1-202ENST00000394633 OCC1Q8TAD7 63 aa15.14■□□□□ 0.01
PCDHA1-202ENST00000394633 FKBP11Q9NYL4 201 aa15.14■□□□□ 0.01
PCDHA1-202ENST00000394633 YTHDF2Q9Y5A9 579 aaKnown RBP15.14■□□□□ 0.01
PCDHA1-202ENST00000394633 TRAV17A0A0B4J275 112 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 YPEL1O60688 119 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 TIMP3P35625 211 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 USF2Q15853 346 aaPredicted RBP15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 TEX38Q6PEX7 206 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 YPEL2Q96QA6 119 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 TMEM140Q9NV12 185 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 RP1L1Q8IWN7 2480 aaPredicted RBP15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 COL8A2P25067 703 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 LOXL3P58215 753 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 RAB4BP61018 213 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 SSMEM1Q8WWF3 244 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 IFI27L2Q9H2X8 130 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 DUSP13Q9UII6 198 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 TCF19Q9Y242 345 aa15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 LSM4Q9Y4Z0 139 aaKnown RBP15.13■□□□□ 0.01
PCDHA1-202ENST00000394633 NBEAQ8NFP9 2946 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 EREGO14944 169 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 IGHG3P01860 377 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 IL6RP08887 468 aaPredicted RBP15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 YPEL3P61236 119 aaPredicted RBP15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 MBNL2Q5VZF2 373 aaKnown RBP15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 C1orf229Q6ZS94 237 aaPredicted RBP15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 C9orf106Q8NAJ2 232 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 C1orf162Q8NEQ5 155 aaPredicted RBP15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 OR10G8Q8NGN5 311 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 A0A1B0GWJ7 208 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 SCGB1D1O95968 90 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 SELLP14151 372 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 GCHFRP30047 84 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 THBS3P49746 956 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 SPATA31B1PQ5VZV4 182 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 OR2Z1Q8NG97 314 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 S1PR3Q99500 378 aa15.12■□□□□ 0.01
PCDHA1-202ENST00000394633 IGHV3OR15-7A0A075B7D8 119 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 IGHV2OR16-5A0A0B4J2B6 119 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 SRRM5B3KS81 715 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 IGLV1-44P01699 117 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 CR1LQ2VPA4 569 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 ARSJQ5FYB0 599 aaPredicted RBP15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 UTF1Q5T230 341 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 DDB2Q92466 427 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 CHODLQ9H9P2 273 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 NPVFQ9HCQ7 196 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 TUBG2Q9NRH3 451 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 POLR3KQ9Y2Y1 108 aaPredicted RBP15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 DSCAML1Q8TD84 2053 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 TRGV8A0A0C4DH27 118 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 IGHV1-18A0A0C4DH31 117 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 K7EN84 100 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 MGST3O14880 152 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 TGIF2LXQ8IUE1 241 aa15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 SEPSECSQ9HD40 501 aaKnown RBP15.11■□□□□ 0.01
PCDHA1-202ENST00000394633 F2RL2O00254 374 aa15.1■□□□□ 0.01
PCDHA1-202ENST00000394633 EFNB3Q15768 340 aa15.1■□□□□ 0.01
PCDHA1-202ENST00000394633 HLA-DRB5Q30154 266 aa15.1■□□□□ 0.01
PCDHA1-202ENST00000394633 IGFL3Q6UXB1 125 aa15.1■□□□□ 0.01
PCDHA1-202ENST00000394633 ZADH2Q8N4Q0 377 aa15.1■□□□□ 0.01
PCDHA1-202ENST00000394633 FAM216AQ8WUB2 273 aa15.1■□□□□ 0.01
PCDHA1-202ENST00000394633 NAGKQ9UJ70 344 aa15.1■□□□□ 0.01
PCDHA1-202ENST00000394633 GRIFINA4D1Z8 144 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 RPL31P62899 125 aaKnown RBP15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 MSMPQ1L6U9 139 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 MS4A10Q96PG2 267 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 TP53TG3Q9ULZ0 132 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 C15orf61A6NNL5 157 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 FOXH1O75593 365 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 C1orf194Q5T5A4 169 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 RBMXL3Q8N7X1 1067 aaKnown RBP15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 STPG3Q8N7X2 389 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 ZNRF1Q8ND25 227 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms