RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 SPEM1Q8N4L4 309 aa13.62□□□□□ -0.23
EFEMP1-202ENST00000394555 OR13A1Q8NGR1 328 aa13.62□□□□□ -0.23
EFEMP1-202ENST00000394555 ASCL3Q9NQ33 180 aa13.62□□□□□ -0.23
EFEMP1-202ENST00000394555 METRNQ9UJH8 293 aa13.62□□□□□ -0.23
EFEMP1-202ENST00000394555 SLC45A2Q9UMX9 530 aa13.62□□□□□ -0.23
EFEMP1-202ENST00000394555 LOXL2Q9Y4K0 774 aa13.62□□□□□ -0.23
EFEMP1-202ENST00000394555 CRYBB3P26998 211 aa13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 IGLC2P0DOY2 106 aa13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 IGLC3P0DOY3 106 aa13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 CXCL12P48061 93 aa13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 RPP30P78346 268 aaKnown RBP13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 FBXW9Q5XUX1 488 aa13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 STPG3Q8N7X2 389 aa13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 HSD17B10Q99714 261 aaKnown RBP13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 C3orf79P0CE67 100 aa13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 CTRLP40313 264 aa13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 GPR12P47775 334 aa13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 LCN12Q6JVE5 192 aa13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 GNB1LQ9BYB4 327 aa13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 GCM1Q9NP62 436 aa13.61□□□□□ -0.23
EFEMP1-202ENST00000394555 TRAV9-1A0A075B6T8 112 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 HELTA6NFD8 242 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 DPRXA6NFQ7 191 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 CCL25O15444 150 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 TBC1D28Q2M2D7 210 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 SLC25A40Q8TBP6 338 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 RNASE8Q8TDE3 154 aaKnown RBP13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 KCNS1Q96KK3 526 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 SFXN3Q9BWM7 321 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 LNP1A1A4G5 178 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 MGST1P10620 155 aaKnown RBP13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 TDGF1P13385 188 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 RHOBP62745 196 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 PSG5Q15238 335 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 HINT2Q9BX68 163 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 ZNF576Q9H609 170 aa13.6□□□□□ -0.23
EFEMP1-202ENST00000394555 M0R1X1 148 aa13.59□□□□□ -0.23
EFEMP1-202ENST00000394555 DCAF12Q5T6F0 453 aa13.59□□□□□ -0.23
EFEMP1-202ENST00000394555 UNQ5815/PRO19632Q6UWF5 114 aa13.59□□□□□ -0.23
EFEMP1-202ENST00000394555 MIR17HGQ75NE6 70 aa13.59□□□□□ -0.23
EFEMP1-202ENST00000394555 GFRA3O60609 400 aa13.59□□□□□ -0.23
EFEMP1-202ENST00000394555 MT-CO2P00403 227 aa13.59□□□□□ -0.23
EFEMP1-202ENST00000394555 CA1P00915 261 aaPredicted RBP13.59□□□□□ -0.23
EFEMP1-202ENST00000394555 PLGLB1Q02325 96 aa13.59□□□□□ -0.23
EFEMP1-202ENST00000394555 SLC35E4Q6ICL7 350 aa13.59□□□□□ -0.23
EFEMP1-202ENST00000394555 NPVFQ9HCQ7 196 aa13.59□□□□□ -0.23
EFEMP1-202ENST00000394555 B4GALT7Q9UBV7 327 aa13.59□□□□□ -0.23
EFEMP1-202ENST00000394555 TET2Q6N021 2002 aaPredicted RBP13.58□□□□□ -0.23
EFEMP1-202ENST00000394555 TRGV10A0A0A0MS01 117 aa13.58□□□□□ -0.23
EFEMP1-202ENST00000394555 RPL39P5Q59GN2 51 aa13.58□□□□□ -0.23
EFEMP1-202ENST00000394555 TMEM136Q6ZRR5 245 aa13.58□□□□□ -0.23
EFEMP1-202ENST00000394555 Q8TCH9 128 aa13.58□□□□□ -0.23
EFEMP1-202ENST00000394555 FAM122AQ96E09 287 aa13.58□□□□□ -0.23
EFEMP1-202ENST00000394555 C1orf159Q96HA4 380 aa13.58□□□□□ -0.23
EFEMP1-202ENST00000394555 GP6Q9HCN6 339 aa13.58□□□□□ -0.23
EFEMP1-202ENST00000394555 GNG12Q9UBI6 72 aa13.58□□□□□ -0.23
EFEMP1-202ENST00000394555 DSPP15924 2871 aaKnown RBP13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 SMPD2O60906 423 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 PROP1O75360 226 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 ZNF324O75467 553 aaPredicted RBP13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 LINC00696Q6ZRV3 163 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 NHLRC2Q8NBF2 726 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 BORCS7Q96B45 105 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 FAM173AQ9BQD7 235 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 CHODLQ9H9P2 273 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 KNTC1P50748 2209 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 AHRRA9YTQ3 701 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 DUTP33316 252 aaKnown RBP13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 ERVK-16P61578 105 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 CX3CL1P78423 397 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 TEPPQ6URK8 271 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 FAM216AQ8WUB2 273 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 FZR1Q9UM11 496 aa13.58□□□□□ -0.24
EFEMP1-202ENST00000394555 TRBV9A0A0B4J1U6 114 aa13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 C9JCJ5 164 aa13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 K7ESF4 209 aa13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 VDAC2P45880 294 aaPredicted RBP13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 ZNF766Q5HY98 468 aa13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 GCNT2Q8N0V5 402 aa13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 NANOS1Q8WY41 292 aaKnown RBP13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 BCL2L2Q92843 193 aaPredicted RBP13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 TTTY12Q9BZ98 90 aa13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 BMPR1BO00238 502 aa13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 IGFBP2P18065 325 aa13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 RPL19P84098 196 aaKnown RBP13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 WDR73Q6P4I2 378 aa13.57□□□□□ -0.24
EFEMP1-202ENST00000394555 OR10J4P0C629 311 aa13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 MPV17P39210 176 aa13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 PRRX1P54821 245 aa13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 TIGITQ495A1 244 aa13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 PRR31Q5SQ13 230 aa13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 NIT1Q86X76 327 aa13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 TCTEX1D1Q8N7M0 179 aa13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 PATE3B3GLJ2 98 aa13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 PRSS46E5RG02 174 aa13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 SPINT2O43291 252 aa13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 OR7C2O60412 319 aa13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 GATA2P23769 480 aaPredicted RBP13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 OR10J3Q5JRS4 329 aa13.56□□□□□ -0.24
EFEMP1-202ENST00000394555 LEMD1Q68G75 181 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms