RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TMEM8BA6NDV4 472 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 NKX2-2O95096 273 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 PF4V1P10720 104 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 CNRIP1Q96F85 164 aaPredicted RBP11.59□□□□□ -0.55
USP49-203ENST00000394253 SMIM14Q96QK8 99 aa11.59□□□□□ -0.55
USP49-203ENST00000394253 HIGD1CA8MV81 97 aa11.58□□□□□ -0.55
USP49-203ENST00000394253 ETHE1O95571 254 aa11.58□□□□□ -0.55
USP49-203ENST00000394253 TFPI2P48307 235 aa11.58□□□□□ -0.55
USP49-203ENST00000394253 FIZ1Q96SL8 496 aa11.58□□□□□ -0.55
USP49-203ENST00000394253 SRSF1Q07955 248 aaKnown RBP eCLIP11.58□□□□□ -0.56
USP49-203ENST00000394253 RFLNAQ6ZTI6 216 aa11.58□□□□□ -0.56
USP49-203ENST00000394253 FGF22Q9HCT0 170 aa11.58□□□□□ -0.56
USP49-203ENST00000394253 MIC13Q5XKP0 118 aa11.58□□□□□ -0.56
USP49-203ENST00000394253 DTX1Q86Y01 620 aa11.58□□□□□ -0.56
USP49-203ENST00000394253 EEF1AKMT3Q96AZ1 226 aa11.58□□□□□ -0.56
USP49-203ENST00000394253 GPR6P46095 362 aaPredicted RBP11.58□□□□□ -0.56
USP49-203ENST00000394253 TRA2AQ13595 282 aaKnown RBP eCLIP11.58□□□□□ -0.56
USP49-203ENST00000394253 SPEM1Q8N4L4 309 aa11.58□□□□□ -0.56
USP49-203ENST00000394253 SEMA5BQ9P283 1151 aa11.58□□□□□ -0.56
USP49-203ENST00000394253 TRACP01848 142 aa11.58□□□□□ -0.56
USP49-203ENST00000394253 NPPCP23582 126 aa11.58□□□□□ -0.56
USP49-203ENST00000394253 HSPE1P61604 102 aaKnown RBP11.58□□□□□ -0.56
USP49-203ENST00000394253 VGLL1Q99990 258 aa11.58□□□□□ -0.56
USP49-203ENST00000394253 SF3B6Q9Y3B4 125 aaKnown RBP11.58□□□□□ -0.56
USP49-203ENST00000394253 DXOO77932 396 aaKnown RBP11.58□□□□□ -0.56
USP49-203ENST00000394253 IMMP2LQ96T52 175 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 PPBPP02775 128 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 NHLRC3Q5JS37 347 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 ST6GALNAC6Q969X2 333 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 GPR146Q96CH1 333 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 BCORQ6W2J9 1755 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 FUT5Q11128 374 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 CHCHD1Q96BP2 118 aaKnown RBP11.57□□□□□ -0.56
USP49-203ENST00000394253 ZFP64Q9NPA5 681 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 FAM208BQ5VWN6 2430 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 C2orf16Q68DN1 1984 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 DENND4CQ5VZ89 1909 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 FOXI3A8MTJ6 420 aaPredicted RBP11.57□□□□□ -0.56
USP49-203ENST00000394253 C2orf82Q6UX34 121 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 WIPI1Q5MNZ9 446 aaPredicted RBP11.57□□□□□ -0.56
USP49-203ENST00000394253 TET2Q6N021 2002 aaPredicted RBP11.57□□□□□ -0.56
USP49-203ENST00000394253 PRR32B1ATL7 298 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 GCSAMQ8N6F7 178 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 VSTM2LQ96N03 204 aa11.57□□□□□ -0.56
USP49-203ENST00000394253 FAM57AQ8TBR7 257 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 RPP21Q9H633 154 aaKnown RBP11.56□□□□□ -0.56
USP49-203ENST00000394253 PLXNB3Q9ULL4 1909 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 C1QL1O75973 258 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 LOXL4Q96JB6 756 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 NABP2Q9BQ15 211 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 SMPXQ9UHP9 88 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 KLK10O43240 276 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 LINC00305Q7Z4B0 112 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 HILPDAQ9Y5L2 63 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 HBDP02042 147 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 INAFM2P0DMQ5 153 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 ZNF658BQ4V348 819 aaPredicted RBP11.56□□□□□ -0.56
USP49-203ENST00000394253 SLC25A53Q5H9E4 307 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 TPTE2P1Q5T6R2 138 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 SFTA2Q6UW10 78 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 H3BMM0 161 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 INO80CQ6PI98 192 aaPredicted RBP11.56□□□□□ -0.56
USP49-203ENST00000394253 PNKDQ8N490 385 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 TMEM190Q8WZ59 177 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 SMIM8Q96KF7 97 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 SP9P0CG40 484 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 ISXQ2M1V0 245 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 CLEC2AQ6UVW9 174 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 GMLQ99445 158 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 CHODLQ9H9P2 273 aa11.56□□□□□ -0.56
USP49-203ENST00000394253 SEPSECSQ9HD40 501 aaKnown RBP11.56□□□□□ -0.56
USP49-203ENST00000394253 FXYD1O00168 92 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 PTCRAQ6ISU1 281 aaPredicted RBP11.55□□□□□ -0.56
USP49-203ENST00000394253 APCDD1LQ8NCL9 501 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 IZUMO1RA6ND01 250 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 SOX8P57073 446 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 C2orf68Q2NKX9 166 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 COL10A1Q03692 680 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 PTPN13Q12923 2485 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 DOPEY1Q5JWR5 2465 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 GUSBP11Q6P575 273 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 KLK13Q9UKR3 277 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 A0A0G2JMM0 328 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 A0A1W2PPB8 328 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 KIR3DP1A8MWS1 328 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 CD5LO43866 347 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 TMEM252Q8N6L7 170 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 GATD1Q8NB37 220 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 REG1BP48304 166 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 ACER2Q5QJU3 275 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 ALKAL1Q6UXT8 129 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 ABHD17AQ96GS6 310 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 TMEM74BQ9NUR3 256 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 IGKCP01834 107 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 BGLAPP02818 100 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 GATAD1Q8WUU5 269 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 COL16A1Q07092 1604 aaPredicted RBP11.55□□□□□ -0.56
USP49-203ENST00000394253 THY1P04216 161 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 NRN1Q9NPD7 142 aa11.55□□□□□ -0.56
USP49-203ENST00000394253 IL11P20809 199 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms