RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 RBFOX2O43251 390 aaKnown RBP eCLIP13.74□□□□□ -0.211e-6■■■■□ 23.2
PDLIM7-205ENST00000393551 FXYD4P59646 89 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 OR2B8PP59922 312 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 POU2AF1Q16633 256 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 KCTD21Q4G0X4 260 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 GPHB5Q86YW7 130 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 ZBTB34Q8NCN2 500 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 OR5AP2Q8NGF4 316 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 GIMAP1Q8WWP7 306 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 NEURL2Q9BR09 285 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 RETNQ9HD89 108 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 DIABLOQ9NR28 239 aa13.74□□□□□ -0.21
PDLIM7-205ENST00000393551 EPPK1P58107 5090 aaKnown RBP13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 IGLC7A0M8Q6 106 aa13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 RBMY1BA6NDE4 496 aaKnown RBP13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 RBMY1EA6NEQ0 496 aaKnown RBP13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 MFSD2BA6NFX1 497 aa13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 RBMY1DP0C7P1 496 aaKnown RBP13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 FAM209BQ5JX69 171 aa13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 LAX1Q8IWV1 398 aa13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 DEFB125Q8N687 156 aa13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 OR4A5Q8NH83 315 aa13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 ISOC1Q96CN7 298 aa13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 WDR89Q96FK6 387 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 HIPK2Q9H2X6 1198 aa13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 PALMDQ9NP74 551 aa13.73□□□□□ -0.21
PDLIM7-205ENST00000393551 TMEM213A2RRL7 107 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 UPK2O00526 184 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 XRCC3O43542 346 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 HPRT1P00492 218 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 CBLN1P23435 193 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 GNRHRP30968 328 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 ARL3P36405 182 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 RPS19P39019 145 aaKnown RBP13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 TAS2R31P59538 309 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 TMEM17Q86X19 198 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 DYNLRB2Q8TF09 96 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 HRASLSQ9HDD0 168 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 ANAPC10Q9UM13 185 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 CEPT1Q9Y6K0 416 aa13.72□□□□□ -0.21
PDLIM7-205ENST00000393551 LCE6AA0A183 80 aa13.71□□□□□ -0.21
PDLIM7-205ENST00000393551 S1PR2O95136 353 aa13.71□□□□□ -0.21
PDLIM7-205ENST00000393551 RFX2P48378 723 aa13.71□□□□□ -0.21
PDLIM7-205ENST00000393551 DHRS11Q6UWP2 260 aa13.71□□□□□ -0.21
PDLIM7-205ENST00000393551 OR10W1Q8NGF6 305 aa13.71□□□□□ -0.21
PDLIM7-205ENST00000393551 OR51H1Q8NH63 302 aa13.71□□□□□ -0.21
PDLIM7-205ENST00000393551 MLXQ9UH92 298 aa13.71□□□□□ -0.21
PDLIM7-205ENST00000393551 A8MWP6 167 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 TMEM127O75204 238 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 TPPPO94811 219 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 CLEC3BP05452 202 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 RPA2P15927 270 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 NQO2P16083 231 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 CBX5P45973 191 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 CATR1Q13166 79 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 UNQ9165/PRO28630Q6UXU0 137 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 TMEM61Q8N0U2 210 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 EEF1AKMT3Q96AZ1 226 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 YIPF6Q96EC8 236 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 FAM110AQ9BQ89 295 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 PLEKHA2Q9HB19 425 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 TMEM140Q9NV12 185 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 SLC2A8Q9NY64 477 aa13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 TECRQ9NZ01 308 aaKnown RBP13.7□□□□□ -0.22
PDLIM7-205ENST00000393551 OR11H12B2RN74 326 aa13.69□□□□□ -0.22
PDLIM7-205ENST00000393551 DHFRP00374 187 aa13.69□□□□□ -0.22
PDLIM7-205ENST00000393551 DEFA4P12838 97 aa13.69□□□□□ -0.22
PDLIM7-205ENST00000393551 HIST1H1BP16401 226 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-205ENST00000393551 GUCA2BQ16661 112 aa13.69□□□□□ -0.22
PDLIM7-205ENST00000393551 TM4SF20Q53R12 229 aa13.69□□□□□ -0.22
PDLIM7-205ENST00000393551 ZNF502Q8TBZ5 544 aa13.69□□□□□ -0.22
PDLIM7-205ENST00000393551 S100A16Q96FQ6 103 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-205ENST00000393551 AIFM2Q9BRQ8 373 aa13.69□□□□□ -0.22
PDLIM7-205ENST00000393551 EHFQ9NZC4 300 aa13.69□□□□□ -0.22
PDLIM7-205ENST00000393551 TRBV7-1A0A0A6YYK4 115 aa13.68□□□□□ -0.22
PDLIM7-205ENST00000393551 ZNF320A2RRD8 509 aa13.68□□□□□ -0.22
PDLIM7-205ENST00000393551 PGLYRP1O75594 196 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-205ENST00000393551 NAT1P18440 290 aa13.68□□□□□ -0.22
PDLIM7-205ENST00000393551 LSM3P62310 102 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-205ENST00000393551 UBE2NLQ5JXB2 153 aa13.68□□□□□ -0.22
PDLIM7-205ENST00000393551 AADACL3Q5VUY0 350 aa13.68□□□□□ -0.22
PDLIM7-205ENST00000393551 LYSMD2Q8IV50 215 aa13.68□□□□□ -0.22
PDLIM7-205ENST00000393551 UXS1Q8NBZ7 420 aa13.68□□□□□ -0.22
PDLIM7-205ENST00000393551 MOB3AQ96BX8 217 aa13.68□□□□□ -0.22
PDLIM7-205ENST00000393551 SRD5A3Q9H8P0 318 aa13.68□□□□□ -0.22
PDLIM7-205ENST00000393551 ALMS1Q8TCU4 4167 aa13.68□□□□□ -0.22
PDLIM7-205ENST00000393551 TEX50A0A1B0GTY4 177 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 PMP2P02689 132 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 RLN1P04808 185 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 IFNA6P05013 189 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 FGF2P09038 288 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 C8orf88P0DMB2 117 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 GPR183P32249 361 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 MFAP2P55001 183 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 TAS2R20P59543 309 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 WT1-ASQ06250 92 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 FAM106AQ4KMX7 169 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 ZNF585BQ52M93 769 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 CROCCP3Q8IVE0 287 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 SAMD12Q8N8I0 201 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms