RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 LINC00311Q8N616 119 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 ST6GALNAC3Q8NDV1 305 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 OR5AN1Q8NGI8 311 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 RAB1CQ92928 201 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 MALSU1Q96EH3 234 aa7.39□□□□□ -1.23
TDP1-202ENST00000393452 ZMAT5Q9UDW3 170 aaKnown RBP7.39□□□□□ -1.23
TDP1-202ENST00000393452 LSM4Q9Y4Z0 139 aaKnown RBP7.39□□□□□ -1.23
TDP1-202ENST00000393452 ANKHD1Q8IWZ3 2542 aaKnown RBP7.39□□□□□ -1.23
TDP1-202ENST00000393452 B4DEV8 164 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 UPK2O00526 184 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 DVL1O14640 695 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 CYB5BO43169 146 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 EIF3GO75821 320 aaKnown RBP eCLIP7.38□□□□□ -1.23
TDP1-202ENST00000393452 OR2C1O95371 312 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 RAB5AP20339 215 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 AGAP20933 346 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 LOXP28300 417 aaPredicted RBP7.38□□□□□ -1.23
TDP1-202ENST00000393452 CHRNB4P30926 498 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 OPRK1P41145 380 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 CD81P60033 236 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 MEF2BQ02080 365 aaPredicted RBP7.38□□□□□ -1.23
TDP1-202ENST00000393452 PNRC1Q12796 327 aaPredicted RBP7.38□□□□□ -1.23
TDP1-202ENST00000393452 FAM71F2Q6NXP2 309 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 FAM24BQ8N5W8 94 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 SLC24A4Q8NFF2 622 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 BET1LQ9NYM9 111 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 NCOR2Q9Y618 2525 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 A0A087X0M5 115 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 IGHV1-69-2A0A0G2JMI3 117 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 A0A1B0GX30 115 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 CXorf65A6NEN9 183 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 TMEM250H0YL14 139 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 PLAUP00749 431 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 NPY1RP25929 384 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 B2MP61769 119 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 PRCDQ00LT1 54 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 WDR25Q64LD2 544 aaPredicted RBP7.38□□□□□ -1.23
TDP1-202ENST00000393452 OSR1Q8TAX0 266 aaPredicted RBP7.38□□□□□ -1.23
TDP1-202ENST00000393452 C1orf159Q96HA4 380 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 MGST2Q99735 147 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 MRPL20Q9BYC9 149 aaKnown RBP7.38□□□□□ -1.23
TDP1-202ENST00000393452 TMPRSS5Q9H3S3 457 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 MANBALQ9NQG1 85 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 SIRT7Q9NRC8 400 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 OR51B2Q9Y5P1 312 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 NBASA2RRP1 2371 aa7.38□□□□□ -1.23
TDP1-202ENST00000393452 MALRD1Q5VYJ5 2156 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 FNDC10F2Z333 226 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 H0YJW9 148 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 HMGB3O15347 200 aaKnown RBP7.37□□□□□ -1.23
TDP1-202ENST00000393452 SIAH2O43255 324 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 KBTBD11O94819 623 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 YIF1AO95070 293 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 FSTL3O95633 263 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 IFNA4P05014 189 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 CDC34P49427 236 aaPredicted RBP7.37□□□□□ -1.23
TDP1-202ENST00000393452 ZNF137PP52743 207 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 RAB5BP61020 215 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 TMEM155Q4W5P6 130 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 ARSJQ5FYB0 599 aaPredicted RBP7.37□□□□□ -1.23
TDP1-202ENST00000393452 LINC01560Q8TB33 94 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 H1FXQ92522 213 aaKnown RBP7.37□□□□□ -1.23
TDP1-202ENST00000393452 ST6GALNAC6Q969X2 333 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 GGTLC1Q9BX51 225 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 SDF2L1Q9HCN8 221 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 BIN3Q9NQY0 253 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 TPRP12270 2363 aaKnown RBP7.37□□□□□ -1.23
TDP1-202ENST00000393452 hCG_1809904A0A1W2PP81 198 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 A0A1W2PR64 198 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 A0A1W2PRV1 198 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 ZNF727A8MUV8 499 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 C1orf196B1AJZ1 125 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 J3QR06 171 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 CCL21O00585 134 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 CA2P00918 260 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 SAA1P0DJI8 122 aaPredicted RBP7.37□□□□□ -1.23
TDP1-202ENST00000393452 DEFA4P12838 97 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 PSMB3P49720 205 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 ATP5IP56385 69 aaPredicted RBP7.37□□□□□ -1.23
TDP1-202ENST00000393452 TMEM177Q53S58 311 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 C11orf42Q8N5U0 333 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 OR5B3Q8NH48 314 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 TMEM186Q96B77 213 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 SAV1Q9H4B6 383 aaPredicted RBP7.37□□□□□ -1.23
TDP1-202ENST00000393452 NPVFQ9HCQ7 196 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 ENY2Q9NPA8 101 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 TMEM242Q9NWH2 141 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 FKBP11Q9NYL4 201 aa7.37□□□□□ -1.23
TDP1-202ENST00000393452 SMCO3A2RU48 225 aa7.36□□□□□ -1.23
TDP1-202ENST00000393452 FAM90A27PA6NNH2 459 aa7.36□□□□□ -1.23
TDP1-202ENST00000393452 APOA2P02652 100 aa7.36□□□□□ -1.23
TDP1-202ENST00000393452 MYOD1P15172 320 aa7.36□□□□□ -1.23
TDP1-202ENST00000393452 GRNP28799 593 aaKnown RBP7.36□□□□□ -1.23
TDP1-202ENST00000393452 BSXQ3C1V8 233 aa7.36□□□□□ -1.23
TDP1-202ENST00000393452 GCSAMLQ5JQS6 135 aa7.36□□□□□ -1.23
TDP1-202ENST00000393452 ZFP82Q8N141 532 aa7.36□□□□□ -1.23
TDP1-202ENST00000393452 C2CD4CQ8TF44 421 aa7.36□□□□□ -1.23
TDP1-202ENST00000393452 SMG1Q96Q15 3661 aaKnown RBP7.36□□□□□ -1.23
TDP1-202ENST00000393452 TRBV23-1A0A0A0MS06 115 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 TEX50A0A1B0GTY4 177 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms