RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 OR10X1Q8NGY0 326 aa12.17□□□□□ -0.46
MKS1-202ENST00000393119 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.17□□□□□ -0.46
MKS1-202ENST00000393119 FAM212BQ9NTI7 297 aaPredicted RBP12.17□□□□□ -0.46
MKS1-202ENST00000393119 ONECUT1Q9UBC0 465 aa12.17□□□□□ -0.46
MKS1-202ENST00000393119 HSPB7Q9UBY9 170 aa12.17□□□□□ -0.46
MKS1-202ENST00000393119 UMAD1C9J7I0 102 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 RD3LP0DJH9 198 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 HIST1H1BP16401 226 aaKnown RBP12.16□□□□□ -0.46
MKS1-202ENST00000393119 DEFA6Q01524 100 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 RHOVQ96L33 236 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 GINS3Q9BRX5 216 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 C20orf24Q9BUV8 137 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 UBR5O95071 2799 aaPredicted RBP12.16□□□□□ -0.46
MKS1-202ENST00000393119 M0R036 132 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 ITGB1BP1O14713 200 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
MKS1-202ENST00000393119 RELBQ01201 579 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 LDLRAD2Q5SZI1 272 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 PNKDQ8N490 385 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 OR8B3Q8NGG8 313 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 OR8B2Q96RD0 313 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 SLC35B3Q9H1N7 401 aa12.16□□□□□ -0.46
MKS1-202ENST00000393119 BTF3P20290 206 aaKnown RBP12.15□□□□□ -0.46
MKS1-202ENST00000393119 RPL23AP62750 156 aaKnown RBP12.15□□□□□ -0.46
MKS1-202ENST00000393119 KLRD1Q13241 179 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 OR4A47Q6IF82 309 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 ZNF833PQ6ZTB9 187 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 NEU4Q8WWR8 484 aaPredicted RBP12.15□□□□□ -0.46
MKS1-202ENST00000393119 RAB1CQ92928 201 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 SLC35D1Q9NTN3 355 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 CHD6Q8TD26 2715 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 CEBPZOSA8MTT3 80 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 ATP6V0CP27449 155 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 TMEM182Q6ZP80 229 aaPredicted RBP12.15□□□□□ -0.46
MKS1-202ENST00000393119 Q8N7P7 452 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 OR13D1Q8NGV5 346 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 CD300LFQ8TDQ1 290 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 DTD1Q8TEA8 209 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 NEIL1Q96FI4 390 aaPredicted RBP12.15□□□□□ -0.46
MKS1-202ENST00000393119 RAB40CQ96S21 281 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 SLC25A31Q9H0C2 315 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 TMEM133Q9H2Q1 129 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 CHODLQ9H9P2 273 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 RAB9BQ9NP90 201 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 GAB2Q9UQC2 676 aa12.15□□□□□ -0.46
MKS1-202ENST00000393119 POLQO75417 2590 aa12.15□□□□□ -0.47
MKS1-202ENST00000393119 THBS3P49746 956 aa12.14□□□□□ -0.47
MKS1-202ENST00000393119 GNB2P62879 340 aa12.14□□□□□ -0.47
MKS1-202ENST00000393119 KIAA0141Q14154 515 aaPredicted RBP12.14□□□□□ -0.47
MKS1-202ENST00000393119 OR4S2Q8NH73 311 aa12.14□□□□□ -0.47
MKS1-202ENST00000393119 SMDT1Q9H4I9 107 aa12.14□□□□□ -0.47
MKS1-202ENST00000393119 DOK5Q9P104 306 aa12.14□□□□□ -0.47
MKS1-202ENST00000393119 WSB1Q9Y6I7 421 aa12.14□□□□□ -0.47
MKS1-202ENST00000393119 TNCP24821 2201 aa12.14□□□□□ -0.47
MKS1-202ENST00000393119 IGHV2-26A0A0B4J1V2 119 aa12.14□□□□□ -0.47
MKS1-202ENST00000393119 H0YJW9 148 aa12.14□□□□□ -0.47
MKS1-202ENST00000393119 SP5Q6BEB4 398 aaPredicted RBP12.14□□□□□ -0.47
MKS1-202ENST00000393119 TET2Q6N021 2002 aaPredicted RBP12.14□□□□□ -0.47
MKS1-202ENST00000393119 OR4A16Q8NH70 328 aa12.14□□□□□ -0.47
MKS1-202ENST00000393119 ST6GALNAC6Q969X2 333 aa12.14□□□□□ -0.47
MKS1-202ENST00000393119 RSG1Q9BU20 258 aa12.14□□□□□ -0.47
MKS1-202ENST00000393119 GAR1Q9NY12 217 aaKnown RBP12.14□□□□□ -0.47
MKS1-202ENST00000393119 LY86O95711 162 aa12.13□□□□□ -0.47
MKS1-202ENST00000393119 GPR6P46095 362 aaPredicted RBP12.13□□□□□ -0.47
MKS1-202ENST00000393119 REC114Q7Z4M0 266 aa12.13□□□□□ -0.47
MKS1-202ENST00000393119 TIMD4Q96H15 378 aa12.13□□□□□ -0.47
MKS1-202ENST00000393119 HINT2Q9BX68 163 aa12.13□□□□□ -0.47
MKS1-202ENST00000393119 BPESC1Q9GZL8 116 aa12.13□□□□□ -0.47
MKS1-202ENST00000393119 E7EUB6 86 aa12.13□□□□□ -0.47
MKS1-202ENST00000393119 OR2C1O95371 312 aa12.13□□□□□ -0.47
MKS1-202ENST00000393119 COL8A1P27658 744 aa12.13□□□□□ -0.47
MKS1-202ENST00000393119 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.13□□□□□ -0.47
MKS1-202ENST00000393119 NABP2Q9BQ15 211 aa12.13□□□□□ -0.47
MKS1-202ENST00000393119 PATZ1Q9HBE1 687 aaKnown RBP12.13□□□□□ -0.47
MKS1-202ENST00000393119 LPAR2Q9HBW0 351 aa12.13□□□□□ -0.47
MKS1-202ENST00000393119 STRAPQ9Y3F4 350 aaKnown RBP12.13□□□□□ -0.47
MKS1-202ENST00000393119 A0A087WWC5 75 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 BORCS7-ASMTA0A0B4J1R7 106 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 A0A1B0GV90 55 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 IGHV4-39P01824 125 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 MMP9P14780 707 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 CNTFRP26992 372 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 CD81P60033 236 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 ERVK-16P61578 105 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 LCN2P80188 198 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 ZNF124Q15973 351 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 STX12Q86Y82 276 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 TCTEX1D1Q8N7M0 179 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 OR10A7Q8NGE5 316 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 OR9G1Q8NH87 305 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 TMEM170AQ8WVE7 144 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 SSBP3Q9BWW4 388 aaPredicted RBP12.12□□□□□ -0.47
MKS1-202ENST00000393119 TPSG1Q9NRR2 321 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 FBXO7Q9Y3I1 522 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 SEC14L6B5MCN3 397 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 RRHO14718 337 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 RBFOX2O43251 390 aaKnown RBP eCLIP12.12□□□□□ -0.47
MKS1-202ENST00000393119 SAA1P0DJI8 122 aaPredicted RBP12.12□□□□□ -0.47
MKS1-202ENST00000393119 CD24P25063 80 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 FBLN7Q53RD9 439 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms