RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 DEFB125Q8N687 156 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PLPPR1Q8TBJ4 325 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SPIN2AQ99865 258 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SPIN2BQ9BPZ2 258 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 RSG1Q9BU20 258 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR10A2Q9H208 303 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 CHODLQ9H9P2 273 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TRAV34A0A0B4J273 112 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 GRIFINA4D1Z8 144 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ZNF716A6NP11 495 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SHISA9B4DS77 424 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 MRPL33O75394 65 aaKnown RBP9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 LYZL6O75951 148 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 HLA-DQA2P01906 255 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ZNF728P0DKX0 622 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OMGP23515 440 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SERF2P84101 59 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 RPL18Q07020 188 aaKnown RBP9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ABCA11PQ4W5N1 156 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 AMMECR1LQ6DCA0 310 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 FER1L6-AS1Q8NA97 138 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 RNF114Q9Y508 228 aa9.51□□□□□ -0.89
TRAF3IP2-208ENST00000392556 IGLV1-36A0A0B4J1U3 117 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 IGHV3-15A0A0B4J1V0 119 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 RNF223E7ERA6 249 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SIRPB1O00241 398 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PPIAL4GP0DN37 164 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 KITLGP21583 273 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 KRTAP1-1Q07627 177 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SPIN3Q5JUX0 258 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ASCL4Q6XD76 172 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ABHD12BQ7Z5M8 362 aaPredicted RBP9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 BAGE3Q86Y29 109 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 BAGE2Q86Y30 109 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ADAT3Q96EY9 351 aaPredicted RBP9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PECRQ9BY49 303 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 NRN1Q9NPD7 142 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OBP2BQ9NPH6 170 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TMEM160Q9NX00 188 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 NIPBLQ6KC79 2804 aaeCLIP9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ZNF878C9JN71 531 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SAP30O75446 220 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 IGHV4-39P01824 125 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 IGLC1P0CG04 106 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SLC25A16P16260 332 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 MC5RP33032 325 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PSMB3P49720 205 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 MRPS34P82930 218 aaKnown RBP9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 FMODQ06828 376 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ZP4Q12836 540 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR4P4Q8NGL7 312 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 MRPL30Q8TCC3 161 aaKnown RBP9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TMEM45BQ96B21 275 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ATP6V0BQ99437 205 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SLC25A15Q9Y619 301 aa9.5□□□□□ -0.89
TRAF3IP2-208ENST00000392556 KIAA1324LA8MWY0 1029 aaPredicted RBP9.49□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SH2D1BO14796 132 aa9.49□□□□□ -0.89
TRAF3IP2-208ENST00000392556 MDH2P40926 338 aaKnown RBP9.49□□□□□ -0.89
TRAF3IP2-208ENST00000392556 C19orf35Q6ZS72 473 aa9.49□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR10W1Q8NGF6 305 aa9.49□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TM2D1Q9BX74 207 aa9.49□□□□□ -0.89
TRAF3IP2-208ENST00000392556 BANF2Q9H503 90 aa9.49□□□□□ -0.89
TRAF3IP2-208ENST00000392556 MOB1AQ9H8S9 216 aa9.49□□□□□ -0.89
TRAF3IP2-208ENST00000392556 LOC102724200A0A096LPH7 203 aaPredicted RBP9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 C17orf112F2Z3M2 114 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TRAPPC2LH3BP13 241 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 CST7O76096 145 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 CD40P25942 277 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ID3Q02535 119 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 LOXL1Q08397 574 aaPredicted RBP9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 GABRA6Q16445 453 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 HIST3H3Q16695 136 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 C11orf71Q6IPW1 123 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ATG4DQ86TL0 474 aaPredicted RBP9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SPSB1Q96BD6 273 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ZNF524Q96C55 264 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TBL2Q9Y4P3 447 aaKnown RBP9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 IGKV1D-8A0A087WSZ0 117 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TRAV9-2A0A087WT02 112 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ODAMA1E959 279 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PRSS37A4D1T9 235 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SLC33A1O00400 549 aaPredicted RBP9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TMPRSS2O15393 492 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SSSCA1O60232 199 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 C9orf135Q5VTT2 229 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR5AS1Q8N127 324 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 CCDC71LQ8N9Z2 235 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR11L1Q8NGX0 322 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 SCGB1C1Q8TD33 95 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR5P3Q8WZ94 311 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ZNF286AQ9HBT8 521 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TMEM38BQ9NVV0 291 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 ANXA10Q9UJ72 324 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR51B2Q9Y5P1 312 aa9.48□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PPIAL4EA0A075B759 164 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 TMED7-TICAM2A0A0A6YYA0 188 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PPIAL4CA0A0B4J2A2 164 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 LOC102725191A0A1B0GVB3 256 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 OR2T8A6NH00 312 aa9.47□□□□□ -0.89
TRAF3IP2-208ENST00000392556 PPIAL4DF5H284 164 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms