RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ZFP36P26651 326 aaKnown RBP9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 HOXA1P49639 335 aaPredicted RBP9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 F2RL1P55085 397 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 RUNX1Q01196 453 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 PRB3Q04118 309 aaPredicted RBP9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 BTNL8Q6UX41 500 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 IL34Q6ZMJ4 242 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 TMEM182Q6ZP80 229 aaPredicted RBP9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 MS4A7Q9GZW8 240 aaPredicted RBP9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 UNKLQ9H9P5 680 aaKnown RBP9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 IGLV2-23P01705 113 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 USF1P22415 310 aaPredicted RBP9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 LMO4P61968 165 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 RPS16P62249 146 aaKnown RBP9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 PRCDQ00LT1 54 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 PAX2Q02962 417 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 VWC2Q2TAL6 325 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 UQCC3Q6UW78 93 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 OR5B3Q8NH48 314 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 CLDND2Q8NHS1 167 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 TMEM167AQ8TBQ9 72 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 RPEQ96AT9 228 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 PSMG3Q9BT73 122 aaPredicted RBP9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 TMEM147Q9BVK8 224 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 WDR61Q9GZS3 305 aaKnown RBP9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 SIRT7Q9NRC8 400 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 INSIG2Q9Y5U4 225 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 KPTNQ9Y664 436 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 UBR5O95071 2799 aaPredicted RBP9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 MYO18BQ8IUG5 2567 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 ODF3BA8MYP8 253 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 IFNA10P01566 189 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 PRH1P02810 166 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 LGALS7P47929 136 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 CAMLGP49069 296 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 HCP5Q6MZN7 132 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 THNSL2Q86YJ6 484 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 HRH4Q9H3N8 390 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 ENY2Q9NPA8 101 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 RFNGQ9Y644 331 aa9.25□□□□□ -0.93
SMARCAL1-203ENST00000392128 ZP3P21754 424 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 HTR1DP28221 377 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 PJVKQ0ZLH3 352 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 ASH1LQ9NR48 2969 aaKnown RBP9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 UQCC1Q9NVA1 299 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 SPTAN1Q13813 2472 aaKnown RBP9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 IGHV2-70DA0A0C4DH43 119 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 TEX50A0A1B0GTY4 177 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 UBE2L5PA0A1B0GUS4 154 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 KRBOX1C9JBD0 128 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 NDUFS8O00217 210 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 MYOD1P15172 320 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 RPL8P62917 257 aaKnown RBP9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 VMA21Q3ZAQ7 101 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 TPTE2P1Q5T6R2 138 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 DPPA3Q6W0C5 159 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 TAF15Q92804 592 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 PLEKHA3Q9HB20 300 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 TIMM9Q9Y5J7 89 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 TNCP24821 2201 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 AKAP6Q13023 2319 aa9.24□□□□□ -0.93
SMARCAL1-203ENST00000392128 A0A1W2PPI3 338 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 PRSS46E5RG02 174 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 RRHO14718 337 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 COX6B1P14854 86 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 FHITP49789 147 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 RAB11AP62491 216 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 LCN2P80188 198 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 VMO1Q7Z5L0 202 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 MOB3BQ86TA1 216 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 SLC24A4Q8NFF2 622 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 TMEM170AQ8WVE7 144 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 FAM168AQ92567 244 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 PIMREGQ9BSJ6 248 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 RSG1Q9BU20 258 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 GGACTQ9BVM4 153 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 SIRPDQ9H106 197 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 DPM3Q9P2X0 92 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 IGHV3-72A0A0B4J1Y9 119 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 INS-IGF2F8WCM5 200 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 MDKP21741 143 aaPredicted RBP9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 CEACAM3P40198 252 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 ATP5IP56385 69 aaPredicted RBP9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 SERF2P84101 59 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 ZNF616Q08AN1 781 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 LDLRAD2Q5SZI1 272 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 AKR1C8PQ5T2L2 129 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 ETV3LQ6ZN32 361 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 CENPVQ7Z7K6 275 aaPredicted RBP9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 FAM213BQ8TBF2 198 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 C10orf105Q8TEF2 133 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 RITA1Q96K30 269 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 COMMD5Q9GZQ3 224 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 NDUFA4L2Q9NRX3 87 aa9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 POLR3KQ9Y2Y1 108 aaPredicted RBP9.23□□□□□ -0.93
SMARCAL1-203ENST00000392128 FOXH1O75593 365 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 NPY1RP25929 384 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 KLRD1Q13241 179 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 COMMD1Q8N668 190 aa9.22□□□□□ -0.93
SMARCAL1-203ENST00000392128 TEX45Q8NA69 505 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms