RNA–Protein interactions for RNA: ENST00000390490.1

TRAJ47-201, Transcript of T cell receptor alpha joining 47, humanhuman

APPRIS P1 BASIC

Gene TRAJ47, Length 57 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ47-201ENST00000390490 TMEM56-RWDD3S4R434 201 aa0.71□□□□□ -2.3
TRAJ47-201ENST00000390490 SEC16AO15027 2179 aa0.71□□□□□ -2.3
TRAJ47-201ENST00000390490 KIF26AQ9ULI4 1882 aaPredicted RBP0.71□□□□□ -2.3
TRAJ47-201ENST00000390490 LTBP4Q8N2S1 1624 aa0.71□□□□□ -2.3
TRAJ47-201ENST00000390490 NUP155O75694 1391 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 EIF3AQ14152 1382 aaKnown RBP0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 PCF11O94913 1555 aaKnown RBP0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 ZNF532Q9HCE3 1301 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 TRAV9-1A0A075B6T8 112 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 EXOC1LA0A1B0GW35 172 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 A0A1W2PQD3 144 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 DPRXA6NFQ7 191 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 GGT3PA6NGU5 568 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 C11orf86A6NJI1 115 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 FAM159BA6NKW6 160 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 KRTAP9-6A8MVA2 160 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 TMEM238C9JI98 176 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 E7EQL1 145 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 LEPROTO15243 131 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 GNRH2O43555 120 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 KLRC4O43908 158 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 ZNF189O75820 626 aaPredicted RBP0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 SERPINE1P05121 402 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 C8GP07360 202 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 RBP1P09455 135 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 P0C880 135 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 ZNF728P0DKX0 622 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 HIST1H2BOP23527 126 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 CD24P25063 80 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 G0S2P27469 103 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 HIST1H2BBP33778 126 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 CA5AP35218 305 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 GNG10P50151 68 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 HIST1H2BDP58876 126 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 HIST1H4AP62805 103 aaKnown RBP0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 HIST1H2BCP62807 126 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 HBA1P69905 142 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 CCL20P78556 96 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 KRR1Q13601 381 aaKnown RBP0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 POU6F1Q14863 301 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 MIAQ16674 131 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 HIST2H2BEQ16778 126 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 C12orf74Q32Q52 190 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 KRTAP13-3Q3SY46 172 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 Q6ZS52 159 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 SLC36A1Q7Z2H8 476 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 TMED4Q7Z7H5 227 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 OR52L1Q8NGH7 329 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 OR4C16Q8NGL9 310 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 GNPDA2Q8TDQ7 276 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 HIST1H2BHQ93079 126 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 HIST1H2BNQ99877 126 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 HIST1H2BMQ99879 126 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 PRRT1Q99946 306 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 NIPSNAP1Q9BPW8 284 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 SELENOSQ9BQE4 189 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 CCDC90BQ9GZT6 254 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 RNASE7Q9H1E1 156 aaKnown RBP0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 C11orf68Q9H3H3 251 aaKnown RBP0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 TUBA4BQ9H853 241 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 UQCC1Q9NVA1 299 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 GID8Q9NWU2 228 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 IL36BQ9NZH7 164 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 ATPIF1Q9UII2 106 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 SHANK1Q9Y566 2161 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 THADAQ6YHU6 1953 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 RTL1A6NKG5 1358 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 ROBO3Q96MS0 1386 aa0.7□□□□□ -2.3
TRAJ47-201ENST00000390490 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 NUP205Q92621 2012 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 ATAD5Q96QE3 1844 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 hCG_1818297A0A087WSY0 165 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 IGKV3D-11A0A0A0MRZ8 115 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 TRGV5A0A0B4J1U4 118 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 A0A0J9YW62 118 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 IRGMA1A4Y4 181 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 A8MT66 165 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 FABP5P3A8MUU1 101 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 ODF3BA8MYP8 253 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 C2orf74A8MZ97 194 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 H3BT86 120 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 CREBL2O60519 120 aaPredicted RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 ATG12O94817 140 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 ZNF682O95780 498 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 IFNA10P01566 189 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 IGKV1-5P01602 117 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 C1QAP02745 245 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 PRM2P04554 102 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 FABP1P07148 127 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 BPGMP07738 259 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 MSMBP08118 114 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 LGALS1P09382 135 aaKnown RBP0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 TFPTP0C1Z6 253 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 SMIM17P0DL12 118 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 SMIM10L2AP0DMW4 78 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 SMIM10L2BP0DMW5 78 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 CYBAP13498 195 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 CCL5P13501 91 aa0.69□□□□□ -2.3
TRAJ47-201ENST00000390490 GZMHP20718 246 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms