RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 LINC00205P59089 165 aa14.71□□□□□ -0.05
SQSTM1-202ENST00000389805 SAPCD1Q5SSQ6 148 aa14.71□□□□□ -0.05
SQSTM1-202ENST00000389805 C1orf174Q8IYL3 243 aa14.71□□□□□ -0.05
SQSTM1-202ENST00000389805 NRN1Q9NPD7 142 aa14.71□□□□□ -0.05
SQSTM1-202ENST00000389805 CADP27708 2225 aa14.71□□□□□ -0.05
SQSTM1-202ENST00000389805 PMS2P5A8MQ11 134 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 GPX1P07203 203 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 FAM19A2Q8N3H0 131 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 RCHY1Q96PM5 261 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 QTRT1Q9BXR0 403 aaKnown RBP14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 SLC45A2Q9UMX9 530 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 INTS1Q8N201 2190 aaKnown RBP14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 ARL14EPLP0DKL9 152 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 FOXF2Q12947 444 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 GABRA6Q16445 453 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 LYG1Q8N1E2 194 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 RNF2Q99496 336 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 NKX6-3A6NJ46 265 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 FAM214BQ7L5A3 538 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 LINC00596Q86U02 117 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 CLCF1Q9UBD9 225 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 UQCR10Q9UDW1 63 aa14.7□□□□□ -0.06
SQSTM1-202ENST00000389805 ICE1Q9Y2F5 2266 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 IGLC2P0DOY2 106 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 IGLC3P0DOY3 106 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 CTRLP40313 264 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 ERVK11-1P61568 191 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 RPL30P62888 115 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 KLF14Q8TD94 323 aaPredicted RBP14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 KCNIP2Q9NS61 270 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 HSPB7Q9UBY9 170 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 TRBV6-6A0A0A6YYG2 114 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 LRP5LA4QPB2 252 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 K7EN84 100 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 PSPNO60542 156 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 FTH1P19P0C7X4 201 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 OR8I2Q8N0Y5 310 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 C9orf106Q8NAJ2 232 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 ST6GALNAC3Q8NDV1 305 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 OBP2BQ9NPH6 170 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 RNF24Q9Y225 148 aa14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 SMG1Q96Q15 3661 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 YLPM1P49750 1951 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 HEATR1Q9H583 2144 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-202ENST00000389805 S1PR2O95136 353 aa14.68□□□□□ -0.06
SQSTM1-202ENST00000389805 NTF3P20783 257 aa14.68□□□□□ -0.06
SQSTM1-202ENST00000389805 MRPL49Q13405 166 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-202ENST00000389805 ATP6V1FQ16864 119 aa14.68□□□□□ -0.06
SQSTM1-202ENST00000389805 UHRF2Q96PU4 802 aa14.68□□□□□ -0.06
SQSTM1-202ENST00000389805 NAT8BQ9UHF3 227 aa14.68□□□□□ -0.06
SQSTM1-202ENST00000389805 PTPRZ1P23471 2315 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-202ENST00000389805 LRRC30A6NM36 301 aa14.68□□□□□ -0.06
SQSTM1-202ENST00000389805 ESDP10768 282 aa14.68□□□□□ -0.06
SQSTM1-202ENST00000389805 KIR2DL2P43627 348 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-202ENST00000389805 ZNF497Q6ZNH5 498 aa14.68□□□□□ -0.06
SQSTM1-202ENST00000389805 IL36BQ9NZH7 164 aa14.68□□□□□ -0.06
SQSTM1-202ENST00000389805 C17orf112F2Z3M2 114 aa14.67□□□□□ -0.06
SQSTM1-202ENST00000389805 RRHO14718 337 aa14.67□□□□□ -0.06
SQSTM1-202ENST00000389805 TCL1AP56279 114 aa14.67□□□□□ -0.06
SQSTM1-202ENST00000389805 LCN12Q6JVE5 192 aa14.67□□□□□ -0.06
SQSTM1-202ENST00000389805 ALKBH7Q9BT30 221 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-202ENST00000389805 PIGBOS1A0A0B4J2F0 54 aa14.67□□□□□ -0.06
SQSTM1-202ENST00000389805 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-202ENST00000389805 FABP6P51161 128 aa14.67□□□□□ -0.06
SQSTM1-202ENST00000389805 HTD2P86397 168 aa14.67□□□□□ -0.06
SQSTM1-202ENST00000389805 Q6ZT83 130 aa14.67□□□□□ -0.06
SQSTM1-202ENST00000389805 GAL3ST2Q9H3Q3 398 aa14.67□□□□□ -0.06
SQSTM1-202ENST00000389805 FAM90A26D6RGX4 464 aa14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 CLDN14O95500 239 aa14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 KLF3P57682 345 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 OR2D2Q9H210 308 aa14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 POLDIP2Q9Y2S7 368 aa14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 RAC2P15153 192 aa14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 RPL31P62899 125 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 UBE2V1Q13404 147 aa14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 PRAMEF6Q5VXH4 476 aa14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 PIP4P1Q86T03 277 aa14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 MMD2Q8IY49 270 aa14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 Q8N7P7 452 aa14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 TPRX1Q8N7U7 411 aa14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 ORAOV1Q8WV07 137 aa14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 YTHDF2Q9Y5A9 579 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-202ENST00000389805 LOC105371242A0A075B767 164 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 C17orf98A8MV24 154 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 M0QZ24 198 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 ZNF253O75346 499 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 C3orf79P0CE67 100 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 AESQ08117 197 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 WDR31Q8NA23 367 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 A0A1W2PS18 150 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 HAND1O96004 215 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 IGHG3P01860 377 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 ZNF83P51522 516 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 LGALS4P56470 323 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 DEFB109BQ30KR1 87 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 MIC13Q5XKP0 118 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 C11orf53Q8IXP5 236 aa14.65□□□□□ -0.06
SQSTM1-202ENST00000389805 IQCF6A8MYZ5 107 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 S100A7P31151 101 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms