RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PROK1P58294 105 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 SRPXP78539 464 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 C10orf55Q5SWW7 151 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 FOXRED2Q8IWF2 684 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 LGI3Q8N145 548 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 STPG2Q8N412 459 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 LRTM2Q8N967 370 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 GRPEL2Q8TAA5 225 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 ARPC1AQ92747 370 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 RRNAD1Q96FB5 475 aaKnown RBP9.97□□□□□ -0.81
SMN1-202ENST00000380707 SEC22CQ9BRL7 303 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 WNT10AQ9GZT5 417 aa9.97□□□□□ -0.81
SMN1-202ENST00000380707 A0A0B4J2A0 478 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 A0A1B0GUS0 222 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 A0A1B0GW64 132 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 MSGN1A6NI15 193 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 INMT-MINDY4F8WBC2 141 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 G3V318 75 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 ACTL6BO94805 426 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 DUS4LO95620 317 aaKnown RBP9.96□□□□□ -0.82
SMN1-202ENST00000380707 MAS1LP35410 378 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 OR2B8PP59922 312 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 DMRTA1Q5VZB9 504 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 C10orf99Q6UWK7 81 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 Q6ZRM9 215 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 KLHDC1Q8N7A1 406 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 SGMS2Q8NHU3 365 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 ABHD5Q8WTS1 349 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 SRSF12Q8WXF0 261 aaKnown RBP9.96□□□□□ -0.82
SMN1-202ENST00000380707 SHPKQ9UHJ6 478 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 WSB1Q9Y6I7 421 aa9.96□□□□□ -0.82
SMN1-202ENST00000380707 SNAPC5O75971 98 aa9.95□□□□□ -0.82
SMN1-202ENST00000380707 FGF2P09038 288 aa9.95□□□□□ -0.82
SMN1-202ENST00000380707 APELAP0DMC3 54 aa9.95□□□□□ -0.82
SMN1-202ENST00000380707 VDAC1P21796 283 aa9.95□□□□□ -0.82
SMN1-202ENST00000380707 RGS21Q2M5E4 152 aa9.95□□□□□ -0.82
SMN1-202ENST00000380707 CENPVQ7Z7K6 275 aaPredicted RBP9.95□□□□□ -0.82
SMN1-202ENST00000380707 ZNF329Q86UD4 541 aa9.95□□□□□ -0.82
SMN1-202ENST00000380707 LFNGQ8NES3 379 aa9.95□□□□□ -0.82
SMN1-202ENST00000380707 OR4A16Q8NH70 328 aa9.95□□□□□ -0.82
SMN1-202ENST00000380707 RNASE11Q8TAA1 199 aaKnown RBP9.95□□□□□ -0.82
SMN1-202ENST00000380707 WIPF2Q8TF74 440 aaPredicted RBP9.95□□□□□ -0.82
SMN1-202ENST00000380707 MITD1Q8WV92 249 aa9.95□□□□□ -0.82
SMN1-202ENST00000380707 LSM10Q969L4 123 aaKnown RBP9.95□□□□□ -0.82
SMN1-202ENST00000380707 GPR146Q96CH1 333 aa9.95□□□□□ -0.82
SMN1-202ENST00000380707 TMEM14BQ9NUH8 114 aa9.95□□□□□ -0.82
SMN1-202ENST00000380707 VWFP04275 2813 aa9.95□□□□□ -0.82
SMN1-202ENST00000380707 TRAV41A0A0B4J266 112 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 TEX50A0A1B0GTY4 177 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 CGB1A6NKQ9 187 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 C15orf61A6NNL5 157 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 IL5P05113 134 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 CRIP2P52943 208 aaPredicted RBP9.94□□□□□ -0.82
SMN1-202ENST00000380707 KRTAP10-3P60369 221 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 CFHR3Q02985 330 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 ECSCRQ19T08 205 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 KRTAP21-3Q3LHN1 58 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 C19orf54Q5BKX5 351 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 NMSQ5H8A3 153 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 ASPHD1Q5U4P2 390 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 FAM219AQ8IW50 185 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 COQ8AQ8NI60 647 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 ZNF431Q8TF32 576 aaPredicted RBP9.94□□□□□ -0.82
SMN1-202ENST00000380707 CHPT1Q8WUD6 406 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 QTRT1Q9BXR0 403 aaKnown RBP9.94□□□□□ -0.82
SMN1-202ENST00000380707 COMMD5Q9GZQ3 224 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 ZNF580Q9UK33 172 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 PRNDQ9UKY0 176 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 FOXA2Q9Y261 457 aaPredicted RBP9.94□□□□□ -0.82
SMN1-202ENST00000380707 OR51B2Q9Y5P1 312 aa9.94□□□□□ -0.82
SMN1-202ENST00000380707 HMX3A6NHT5 357 aa9.93□□□□□ -0.82
SMN1-202ENST00000380707 TEX22C9J3V5 150 aa9.93□□□□□ -0.82
SMN1-202ENST00000380707 RBMXL2O75526 392 aaKnown RBP9.93□□□□□ -0.82
SMN1-202ENST00000380707 ADAP1O75689 374 aa9.93□□□□□ -0.82
SMN1-202ENST00000380707 HOXB5P09067 269 aa9.93□□□□□ -0.82
SMN1-202ENST00000380707 PPIFP30405 207 aaKnown RBP9.93□□□□□ -0.82
SMN1-202ENST00000380707 RPL27AP46776 148 aaKnown RBP9.93□□□□□ -0.82
SMN1-202ENST00000380707 SRSF4Q08170 494 aaKnown RBP9.93□□□□□ -0.82
SMN1-202ENST00000380707 AKIRIN2Q53H80 203 aa9.93□□□□□ -0.82
SMN1-202ENST00000380707 MINDY2Q8NBR6 621 aa9.93□□□□□ -0.82
SMN1-202ENST00000380707 WFDC12Q8WWY7 111 aa9.93□□□□□ -0.82
SMN1-202ENST00000380707 FYTTD1Q96QD9 318 aaKnown RBP9.93□□□□□ -0.82
SMN1-202ENST00000380707 PHB2Q99623 299 aa9.93□□□□□ -0.82
SMN1-202ENST00000380707 SPIN2AQ99865 258 aa9.93□□□□□ -0.82
SMN1-202ENST00000380707 SPIN2BQ9BPZ2 258 aa9.93□□□□□ -0.82
SMN1-202ENST00000380707 NDUFA4L2Q9NRX3 87 aa9.93□□□□□ -0.82
SMN1-202ENST00000380707 CACNG5Q9UF02 275 aa9.93□□□□□ -0.82
SMN1-202ENST00000380707 PIGBOS1A0A0B4J2F0 54 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 DUXBA0A1W2PPF3 345 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 PSMB11A5LHX3 300 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 DHFRP00374 187 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 TMEM267Q0VDI3 215 aaPredicted RBP9.92□□□□□ -0.82
SMN1-202ENST00000380707 HIST2H2BDQ6DRA6 164 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 UNQ5815/PRO19632Q6UWF5 114 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 ZNF429Q86V71 674 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 OR5AU1Q8NGC0 362 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 OR10W1Q8NGF6 305 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 GON7Q9BXV9 100 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.92□□□□□ -0.82
SMN1-202ENST00000380707 FKBP11Q9NYL4 201 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms