RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 TM2D2Q9BX73 214 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 NXF5Q9H1B4 397 aaKnown RBP7.86□□□□□ -1.15
PTPRA-204ENST00000380393 AKIRIN1Q9H9L7 192 aaPredicted RBP7.86□□□□□ -1.15
PTPRA-204ENST00000380393 R4GMQ9 66 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 R4GN57 208 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 F8W1H4 67 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 PEBP1P30086 187 aaKnown RBP7.86□□□□□ -1.15
PTPRA-204ENST00000380393 OR1D4P47884 311 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 ATP5G3P48201 142 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 XGP55808 180 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 DPTQ07507 201 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 ZFAND6Q6FIF0 208 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 OCC1Q8TAD7 63 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 PMCHL2Q9BQD1 86 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 HES4Q9HCC6 221 aa7.86□□□□□ -1.15
PTPRA-204ENST00000380393 ABHD14BQ96IU4 210 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 MS4A6AQ9H2W1 248 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 ANXA10Q9UJ72 324 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 LINC00312Q9Y6C7 94 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 CELSR3Q9NYQ7 3312 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 CACNA1DQ01668 2161 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 NCKAP5O14513 1909 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 SYS1-DBNDD2H3BUS1 97 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 APCSP02743 223 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 COX8AP10176 69 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 COL9A1P20849 921 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 REG1BP48304 166 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 ID3Q02535 119 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 DEFB110Q30KQ9 67 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 TEX29Q8N6K0 151 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 ZNF525Q8N782 197 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 GPX7Q96SL4 187 aaPredicted RBP7.85□□□□□ -1.15
PTPRA-204ENST00000380393 CDIP1Q9H305 208 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 DYSFO75923 2080 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 TRBV20OR9-2A0A075B6H5 130 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 C19orf67A6NJJ6 358 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 DHHO43323 396 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 HLA-DQA1P01909 254 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 OR8B8Q15620 311 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 TMEM42Q69YG0 159 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 CBLN3Q6UW01 205 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.85□□□□□ -1.15
PTPRA-204ENST00000380393 DGAT2Q96PD7 388 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 MCRIP2Q9BUT9 160 aaKnown RBP7.85□□□□□ -1.15
PTPRA-204ENST00000380393 UBTD1Q9HAC8 227 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 WDFY3Q8IZQ1 3526 aa7.85□□□□□ -1.15
PTPRA-204ENST00000380393 C3orf85A0A1B0GTC6 90 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 UBE2L5PA0A1B0GUS4 154 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 A0A1W2PP55 124 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 hADV38S2A0JD32 116 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 HLA-DOBP13765 273 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 TCL1AP56279 114 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 OR1D5P58170 312 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 TMEM196Q5HYL7 178 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 OR10G9Q8NGN4 311 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 OR10G7Q8NGN6 311 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 A0A1W2PQM1 296 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 KIR2DL1P43626 348 aaPredicted RBP7.84□□□□□ -1.15
PTPRA-204ENST00000380393 KIR2DS4P43632 304 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 KLRD1Q13241 179 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 C1orf147Q96MC9 270 aaPredicted RBP7.84□□□□□ -1.15
PTPRA-204ENST00000380393 RABAC1Q9UI14 185 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 PRSS29PA6NIE9 313 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 C17orf51A8MQB3 221 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 CT45A10P0DMU9 189 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 SMIM10L1P0DMW3 83 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 KIR2DL2P43627 348 aaPredicted RBP7.84□□□□□ -1.15
PTPRA-204ENST00000380393 SSX8Q7RTT4 187 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 C6orf201Q7Z4U5 140 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 GCSAMQ8N6F7 178 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 NAT6Q93015 286 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 TMEM54Q969K7 222 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 SMIM10Q96HG1 83 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 FOXQ1Q9C009 403 aa7.84□□□□□ -1.15
PTPRA-204ENST00000380393 SH2D7A6NKC9 451 aaPredicted RBP7.83□□□□□ -1.16
PTPRA-204ENST00000380393 IGHV3-7P01780 117 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 NHLRC4P0CG21 123 aaPredicted RBP7.83□□□□□ -1.16
PTPRA-204ENST00000380393 ZNF823P16415 610 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 PSG7Q13046 419 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 TAF15Q92804 592 aaKnown RBP eCLIP7.83□□□□□ -1.16
PTPRA-204ENST00000380393 OR4C12Q96R67 309 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 ABCA7Q8IZY2 2146 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 FOXH1O75593 365 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 AMY1AP04745 511 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 ARL16Q0P5N6 197 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 EMC4Q5J8M3 183 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 FAM69BQ5VUD6 431 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 TMEM92Q6UXU6 159 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 LINC00114Q6XXX2 140 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 C1orf210Q8IVY1 113 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 OR52N5Q8NH56 324 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 TMEM222Q9H0R3 208 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 PHPT1Q9NRX4 125 aaPredicted RBP7.83□□□□□ -1.16
PTPRA-204ENST00000380393 COA3Q9Y2R0 106 aaPredicted RBP7.83□□□□□ -1.16
PTPRA-204ENST00000380393 SEC16AO15027 2179 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 IGKV1D-42A0A075B6H8 117 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 A0A1W2PRD5 423 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 A0A1W2PRF3 423 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 A0A1W2PRM7 423 aa7.83□□□□□ -1.16
PTPRA-204ENST00000380393 CFIP05156 583 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms