RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 TMEM250H0YL14 139 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 TSPOP30536 169 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 H2BFWTQ7Z2G1 175 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 OR10P1Q8NGE3 313 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 GALMQ96C23 342 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 RTL8AQ9BWD3 113 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 MRPL18Q9H0U6 180 aaKnown RBP10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 CHTOPQ9Y3Y2 248 aaKnown RBP10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 IGHV3OR15-7A0A075B7D8 119 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 J3QT63 122 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 RBFOX2O43251 390 aaKnown RBP eCLIP10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 CIDEAO60543 219 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 FCGR3BO75015 233 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 HAND1O96004 215 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 HBZP02008 142 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 TNFSF4P23510 183 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 ATP5G3P48201 142 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 AMTP48728 403 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 SRSF6Q13247 344 aaKnown RBP10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 KRTAP27-1Q3LI81 207 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 FAM201AQ5SY85 155 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 Q6P435 159 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 WFDC8Q8IUA0 241 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 BCL2L2Q92843 193 aaPredicted RBP10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 SEPSECSQ9HD40 501 aaKnown RBP10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 ZNF586Q9NXT0 402 aa10.4□□□□□ -0.74
PRPF40B-202ENST00000380281 A0A1W2PNU3 283 aaPredicted RBP10.4□□□□□ -0.75
PRPF40B-202ENST00000380281 PSG7Q13046 419 aa10.4□□□□□ -0.75
PRPF40B-202ENST00000380281 KIAA1644Q3SXP7 199 aa10.4□□□□□ -0.75
PRPF40B-202ENST00000380281 PRR31Q5SQ13 230 aa10.4□□□□□ -0.75
PRPF40B-202ENST00000380281 LCN12Q6JVE5 192 aa10.4□□□□□ -0.75
PRPF40B-202ENST00000380281 ZC2HC1AQ96GY0 325 aa10.4□□□□□ -0.75
PRPF40B-202ENST00000380281 CDX2Q99626 313 aaPredicted RBP10.4□□□□□ -0.75
PRPF40B-202ENST00000380281 NDUFB4O95168 129 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 SLC25A6P12236 298 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 TBC1D28Q2M2D7 210 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 Q6ZR03 302 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 NRN1Q9NPD7 142 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 GNG12Q9UBI6 72 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 C11orf94C9JXX5 98 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM19A2Q8N3H0 131 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 DEFB108BQ8NET1 73 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 NEIL1Q96FI4 390 aaPredicted RBP10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 C5orf30Q96GV9 206 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 TRIB1Q96RU8 372 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 MPC1Q9Y5U8 109 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 WNK2Q9Y3S1 2297 aa10.39□□□□□ -0.75
PRPF40B-202ENST00000380281 OR5B21A6NL26 309 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 LINC00473A8K010 186 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 SLC17A3O00476 420 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FCN1O00602 326 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 IER3P46695 156 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 TMEM164Q5U3C3 297 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 ABHD12Q8N2K0 398 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 LRFN3Q9BTN0 628 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 HEYLQ9NQ87 328 aaPredicted RBP10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 ABI3Q9P2A4 366 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 HSPB7Q9UBY9 170 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 HCFC1P51610 2035 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 TIMM8AO60220 97 aaPredicted RBP10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 ACTL6BO94805 426 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 GPX1P07203 203 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 CCL11P51671 97 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 SLC35B1P78383 322 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 SERF2P84101 59 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 Q5PR19 223 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 OR13A1Q8NGR1 328 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 A0A1W2PPV4 95 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A10PA6NDY2 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A18PA6NE21 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A16PA6NEW6 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A20PA6NIJ5 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A8PA6NJQ4 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A7PA6NKC0 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A22PA8MWA6 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A12PA8MX19 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A5PA8MXJ8 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A23PA8MXZ1 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 TNFSF15O95150 251 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A15PP0C7V4 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A13PP0C7W8 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A14PP0C7W9 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 FAM90A24PP0C7X0 464 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 MYOD1P15172 320 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 ZNF90Q03938 601 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 SVIPQ8NHG7 77 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 CORO2AQ92828 525 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 RCHY1Q96PM5 261 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 QTRT1Q9BXR0 403 aaKnown RBP10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 STRADBQ9C0K7 418 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 SLC35D1Q9NTN3 355 aa10.38□□□□□ -0.75
PRPF40B-202ENST00000380281 CEP295Q9C0D2 2601 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 GOSR1O95249 250 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 KRTCAP3Q53RY4 240 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 UTF1Q5T230 341 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 OR4A47Q6IF82 309 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 ZNF497Q6ZNH5 498 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 ST6GALNAC6Q969X2 333 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 PSMG3Q9BT73 122 aaPredicted RBP10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 GNB4Q9HAV0 340 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms