RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.7■□□□□ 0.74
ECHDC3-201ENST00000379215 NBR2O15453 112 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 CRYGBP07316 175 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 PAX9P55771 341 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 MMDQ15546 238 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 RUSC1-AS1Q66K80 236 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 RITA1Q96K30 269 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 MEGF9Q9H1U4 602 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 METTL1Q9UBP6 276 aaKnown RBP19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 ITGB1BP2Q9UKP3 347 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 SIGLEC9Q9Y336 463 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 KCNAB3O43448 404 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 TMEM50AO95807 157 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 HOXA1P49639 335 aaPredicted RBP19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 PRCDQ00LT1 54 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 TMEM252Q8N6L7 170 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 OR1L8Q8NGR8 309 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 C1RLQ9NZP8 487 aa19.69■□□□□ 0.74
ECHDC3-201ENST00000379215 IGHV3OR16-10A0A075B7F0 116 aa19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 RRHO14718 337 aa19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 ACTL6BO94805 426 aa19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 NDUFA3O95167 84 aa19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 FBP1P09467 338 aa19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 EWSR1Q01844 656 aaKnown RBP eCLIP19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 PRSS8Q16651 343 aa19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 BRD3OSQ6XYD6 125 aa19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 SLC51BQ86UW2 128 aa19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 PPP1R27Q86WC6 154 aa19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 MRPL41Q8IXM3 137 aaKnown RBP19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 ZNF430Q9H8G1 570 aaPredicted RBP19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 PLEKHA3Q9HB20 300 aa19.68■□□□□ 0.74
ECHDC3-201ENST00000379215 FAM24AA6NFZ4 105 aa19.67■□□□□ 0.74
ECHDC3-201ENST00000379215 AVPP01185 164 aa19.67■□□□□ 0.74
ECHDC3-201ENST00000379215 TMEM11P17152 192 aa19.67■□□□□ 0.74
ECHDC3-201ENST00000379215 PLGLAQ15195 96 aa19.67■□□□□ 0.74
ECHDC3-201ENST00000379215 KLF17Q5JT82 389 aaPredicted RBP19.67■□□□□ 0.74
ECHDC3-201ENST00000379215 Q8N6K4 173 aa19.67■□□□□ 0.74
ECHDC3-201ENST00000379215 NANPQ8TBE9 248 aa19.67■□□□□ 0.74
ECHDC3-201ENST00000379215 ZDHHC16Q969W1 377 aa19.67■□□□□ 0.74
ECHDC3-201ENST00000379215 STRAPQ9Y3F4 350 aaKnown RBP19.67■□□□□ 0.74
ECHDC3-201ENST00000379215 PRRC2AP48634 2157 aaKnown RBP19.67■□□□□ 0.74
ECHDC3-201ENST00000379215 CR1P17927 2039 aa19.67■□□□□ 0.74
ECHDC3-201ENST00000379215 VPS13CQ709C8 3753 aa19.66■□□□□ 0.74
ECHDC3-201ENST00000379215 A0A1W2PN81 502 aa19.66■□□□□ 0.74
ECHDC3-201ENST00000379215 CHRNA7P36544 502 aa19.66■□□□□ 0.74
ECHDC3-201ENST00000379215 SULT1A1P50225 295 aa19.66■□□□□ 0.74
ECHDC3-201ENST00000379215 F2RL1P55085 397 aa19.66■□□□□ 0.74
ECHDC3-201ENST00000379215 RBMXL1Q96E39 390 aaKnown RBP19.66■□□□□ 0.74
ECHDC3-201ENST00000379215 HEYLQ9NQ87 328 aaPredicted RBP19.66■□□□□ 0.74
ECHDC3-201ENST00000379215 A0A0U1RQK1 487 aa19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 TEX50A0A1B0GTY4 177 aa19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 IGSF23A1L1A6 192 aa19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 EIF5AP63241 154 aaKnown RBP19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 AANATQ16613 207 aa19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 SPANXN5Q5MJ07 72 aa19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 U3KQ87 197 aa19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 CREBBPQ92793 2442 aa19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 INS-IGF2F8WCM5 200 aa19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 H3BP45 60 aa19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 CNTFRP26992 372 aa19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 VDAC2P45880 294 aaPredicted RBP19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 ATP5IP56385 69 aaPredicted RBP19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 UBA52P62987 128 aaKnown RBP19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 HNF4GQ14541 408 aa19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 NDUFA4L2Q9NRX3 87 aa19.65■□□□□ 0.74
ECHDC3-201ENST00000379215 PAX6P26367 422 aa19.64■□□□□ 0.73
ECHDC3-201ENST00000379215 HBG1P69891 147 aa19.64■□□□□ 0.73
ECHDC3-201ENST00000379215 HBG2P69892 147 aa19.64■□□□□ 0.73
ECHDC3-201ENST00000379215 SPINK9Q5DT21 86 aa19.64■□□□□ 0.73
ECHDC3-201ENST00000379215 TMEM14EPQ6UXP3 125 aa19.64■□□□□ 0.73
ECHDC3-201ENST00000379215 STPG2Q8N412 459 aa19.64■□□□□ 0.73
ECHDC3-201ENST00000379215 HINT2Q9BX68 163 aa19.64■□□□□ 0.73
ECHDC3-201ENST00000379215 ZNF471Q9BX82 626 aaPredicted RBP19.64■□□□□ 0.73
ECHDC3-201ENST00000379215 FBXL15Q9H469 300 aa19.64■□□□□ 0.73
ECHDC3-201ENST00000379215 FBXL17Q9UF56 701 aa19.64■□□□□ 0.73
ECHDC3-201ENST00000379215 CD24P25063 80 aa19.63■□□□□ 0.73
ECHDC3-201ENST00000379215 TPSG1Q9NRR2 321 aa19.63■□□□□ 0.73
ECHDC3-201ENST00000379215 PDZD2O15018 2839 aa19.63■□□□□ 0.73
ECHDC3-201ENST00000379215 HECTD1Q9ULT8 2610 aa19.63■□□□□ 0.73
ECHDC3-201ENST00000379215 FSHBP01225 129 aa19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 C5orf64Q2M2E5 130 aa19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 LRRC75BQ2VPJ9 315 aa19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 SMAD7O15105 426 aaKnown RBP19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 JTBO76095 146 aa19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 COMPP49747 757 aaPredicted RBP19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 NHLH2Q02577 135 aa19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 TNXAQ16473 311 aa19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 C9orf139Q6ZV77 190 aa19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 HSD17B13Q7Z5P4 300 aaPredicted RBP19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 CIARTQ8N365 385 aaPredicted RBP19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 OR1S2Q8NGQ3 325 aa19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 STOML3Q8TAV4 291 aa19.62■□□□□ 0.73
ECHDC3-201ENST00000379215 BORCS7-ASMTA0A0B4J1R7 106 aa19.61■□□□□ 0.73
ECHDC3-201ENST00000379215 NCBP2LA6PVI3 153 aaKnown RBP19.61■□□□□ 0.73
ECHDC3-201ENST00000379215 IFNA10P01566 189 aa19.61■□□□□ 0.73
ECHDC3-201ENST00000379215 RPL27AP46776 148 aaKnown RBP19.61■□□□□ 0.73
ECHDC3-201ENST00000379215 RAB11AP62491 216 aa19.61■□□□□ 0.73
ECHDC3-201ENST00000379215 ERHP84090 104 aaKnown RBP19.61■□□□□ 0.73
ECHDC3-201ENST00000379215 ZNF266Q14584 549 aa19.61■□□□□ 0.73
ECHDC3-201ENST00000379215 MRGPRG-AS1Q2M3A8 158 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms