RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 ACAA1P09110 424 aaPredicted RBP16.52■□□□□ 0.23
PCDH8-202ENST00000377942 OR11H4Q8NGC9 324 aa16.52■□□□□ 0.23
PCDH8-202ENST00000377942 TGFAP01135 160 aa16.52■□□□□ 0.23
PCDH8-202ENST00000377942 FAM3BP58499 235 aaPredicted RBP16.52■□□□□ 0.23
PCDH8-202ENST00000377942 LRP11Q86VZ4 500 aa16.52■□□□□ 0.23
PCDH8-202ENST00000377942 SLC25A15Q9Y619 301 aa16.52■□□□□ 0.23
PCDH8-202ENST00000377942 TRGV3P03979 118 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 MFAP2P55001 183 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 IBA57Q5T440 356 aaKnown RBP16.51■□□□□ 0.23
PCDH8-202ENST00000377942 CACNG8Q8WXS5 425 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 TMEM133Q9H2Q1 129 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 CYP2G1PQ6ZSU1 146 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 EAF1Q96JC9 268 aaPredicted RBP16.51■□□□□ 0.23
PCDH8-202ENST00000377942 AURKAIP1Q9NWT8 199 aaPredicted RBP16.51■□□□□ 0.23
PCDH8-202ENST00000377942 FUT9Q9Y231 359 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 TRAV24A0A0B4J272 114 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 ELOBQ15370 118 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 SIGLEC5O15389 551 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 RBFOX2O43251 390 aaKnown RBP eCLIP16.51■□□□□ 0.23
PCDH8-202ENST00000377942 ARL14EPLP0DKL9 152 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 MAS1LP35410 378 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 TUSC1Q2TAM9 212 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 TMEM97Q5BJF2 176 aa16.51■□□□□ 0.23
PCDH8-202ENST00000377942 SRRM5B3KS81 715 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 SMAD7O15105 426 aaKnown RBP16.5■□□□□ 0.23
PCDH8-202ENST00000377942 PLA2G2CQ5R387 149 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 SYT8Q8NBV8 401 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 ST6GALNAC3Q8NDV1 305 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 TCAPO15273 167 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 TSPOP30536 169 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 DSCR9P59020 149 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 SRSF7Q16629 238 aaKnown RBP eCLIP16.5■□□□□ 0.23
PCDH8-202ENST00000377942 RNASEH2CQ8TDP1 164 aaKnown RBP16.5■□□□□ 0.23
PCDH8-202ENST00000377942 TNFRSF14Q92956 283 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 CCL3L1P16619 93 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 NHLRC3Q5JS37 347 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 TSC2P49815 1807 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 IL4P05112 153 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 PPP1R27Q86WC6 154 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 DDB2Q92466 427 aa16.5■□□□□ 0.23
PCDH8-202ENST00000377942 MPZP25189 248 aa16.49■□□□□ 0.23
PCDH8-202ENST00000377942 MORN2Q502X0 79 aa16.49■□□□□ 0.23
PCDH8-202ENST00000377942 ZP1P60852 638 aa16.49■□□□□ 0.23
PCDH8-202ENST00000377942 PAQR4Q8N4S7 273 aaPredicted RBP16.49■□□□□ 0.23
PCDH8-202ENST00000377942 ARPC1AQ92747 370 aa16.49■□□□□ 0.23
PCDH8-202ENST00000377942 RAX2Q96IS3 184 aa16.49■□□□□ 0.23
PCDH8-202ENST00000377942 SNRPCP09234 159 aaKnown RBP16.49■□□□□ 0.23
PCDH8-202ENST00000377942 M0QZK8 103 aa16.49■□□□□ 0.23
PCDH8-202ENST00000377942 TMEM8BA6NDV4 472 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 HERVK_113P61574 105 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 Q6ZN92 141 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 MAP1LC3CQ9BXW4 147 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 CACNA1HO95180 2353 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 HAX1O00165 279 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 DLX6P56179 175 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 FBXL7Q9UJT9 491 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 LY6G6EA0A0G2JKS1 128 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 SIAH2O43255 324 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 Q5BKY6 102 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 WFIKKN1Q96NZ8 548 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 HSPB8Q9UJY1 196 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 U3KQA8 63 aa16.48■□□□□ 0.23
PCDH8-202ENST00000377942 C2orf68Q2NKX9 166 aa16.47■□□□□ 0.23
PCDH8-202ENST00000377942 GSX1Q9H4S2 264 aaPredicted RBP16.47■□□□□ 0.23
PCDH8-202ENST00000377942 C21orf62Q9NYP8 219 aa16.47■□□□□ 0.23
PCDH8-202ENST00000377942 CDC42EP3Q9UKI2 254 aa16.47■□□□□ 0.23
PCDH8-202ENST00000377942 IL6RP08887 468 aaPredicted RBP16.47■□□□□ 0.23
PCDH8-202ENST00000377942 FAM169BQ8N8A8 192 aa16.47■□□□□ 0.23
PCDH8-202ENST00000377942 KLHDC3Q9BQ90 382 aa16.47■□□□□ 0.23
PCDH8-202ENST00000377942 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.47■□□□□ 0.23
PCDH8-202ENST00000377942 GCHFRP30047 84 aa16.47■□□□□ 0.23
PCDH8-202ENST00000377942 C20orf204Q6ZNR8 217 aa16.47■□□□□ 0.23
PCDH8-202ENST00000377942 ZNF418Q8TF45 676 aaPredicted RBP16.47■□□□□ 0.23
PCDH8-202ENST00000377942 SAA2-SAA4A0A096LPE2 208 aa16.47■□□□□ 0.23
PCDH8-202ENST00000377942 SAA2P0DJI9 122 aaPredicted RBP16.47■□□□□ 0.23
PCDH8-202ENST00000377942 CA7P43166 264 aa16.47■□□□□ 0.23
PCDH8-202ENST00000377942 SNRPD3P62318 126 aaKnown RBP16.47■□□□□ 0.23
PCDH8-202ENST00000377942 SH3BGRL3Q9H299 93 aa16.47■□□□□ 0.23
PCDH8-202ENST00000377942 UPK2O00526 184 aa16.46■□□□□ 0.23
PCDH8-202ENST00000377942 NBR2O15453 112 aa16.46■□□□□ 0.23
PCDH8-202ENST00000377942 NUP37Q8NFH4 326 aa16.46■□□□□ 0.23
PCDH8-202ENST00000377942 NPCDR1Q9BY65 106 aa16.46■□□□□ 0.23
PCDH8-202ENST00000377942 PTPRDP23468 1912 aa16.46■□□□□ 0.23
PCDH8-202ENST00000377942 A0A087WV48 116 aa16.46■□□□□ 0.23
PCDH8-202ENST00000377942 TMEM250H0YL14 139 aa16.46■□□□□ 0.23
PCDH8-202ENST00000377942 Q1RN00 199 aa16.46■□□□□ 0.23
PCDH8-202ENST00000377942 FOXL2NBQ6ZUU3 175 aa16.46■□□□□ 0.23
PCDH8-202ENST00000377942 MYOZ3Q8TDC0 251 aa16.46■□□□□ 0.23
PCDH8-202ENST00000377942 NLRC5Q86WI3 1866 aa16.46■□□□□ 0.23
PCDH8-202ENST00000377942 EFNA4P52798 201 aa16.45■□□□□ 0.22
PCDH8-202ENST00000377942 ZCCHC24Q8N2G6 241 aaKnown RBP16.45■□□□□ 0.22
PCDH8-202ENST00000377942 A0A0G2JNJ9 132 aa16.45■□□□□ 0.22
PCDH8-202ENST00000377942 TWIST1Q15672 202 aa16.45■□□□□ 0.22
PCDH8-202ENST00000377942 ZNF672Q499Z4 452 aaPredicted RBP16.45■□□□□ 0.22
PCDH8-202ENST00000377942 Q9UFV3 132 aa16.45■□□□□ 0.22
PCDH8-202ENST00000377942 FREM3P0C091 2139 aa16.45■□□□□ 0.22
PCDH8-202ENST00000377942 CACNA1DQ01668 2161 aa16.45■□□□□ 0.22
PCDH8-202ENST00000377942 K7ENP7 123 aa16.45■□□□□ 0.22
PCDH8-202ENST00000377942 SAPCD1Q5SSQ6 148 aa16.45■□□□□ 0.22
PCDH8-202ENST00000377942 CLDN16Q9Y5I7 305 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms