RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 SSX2Q16385 188 aa11.9□□□□□ -0.5
POLR1E-202ENST00000377798 HIST2H2BCQ6DN03 193 aa11.9□□□□□ -0.5
POLR1E-202ENST00000377798 OR5B3Q8NH48 314 aa11.9□□□□□ -0.5
POLR1E-202ENST00000377798 TSNAXQ99598 290 aaKnown RBP11.9□□□□□ -0.5
POLR1E-202ENST00000377798 RNF5Q99942 180 aa11.9□□□□□ -0.5
POLR1E-202ENST00000377798 ARV1Q9H2C2 271 aa11.9□□□□□ -0.5
POLR1E-202ENST00000377798 HIPK2Q9H2X6 1198 aa11.9□□□□□ -0.5
POLR1E-202ENST00000377798 TNCP24821 2201 aa11.9□□□□□ -0.51
POLR1E-202ENST00000377798 B4DSR2 109 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 VENTXO95231 258 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 MYOD1P15172 320 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 HBG1P69891 147 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 HBG2P69892 147 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 HAPLN4Q86UW8 402 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 MBD6Q96DN6 1003 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 ATP5SQ99766 215 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 HEYLQ9NQ87 328 aaPredicted RBP11.89□□□□□ -0.51
POLR1E-202ENST00000377798 TEX50A0A1B0GTY4 177 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 DFFBO76075 338 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 PRCDQ00LT1 54 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 ARL16Q0P5N6 197 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 FAM74A1Q5RGS3 127 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 EIF5AL1Q6IS14 154 aaKnown RBP11.89□□□□□ -0.51
POLR1E-202ENST00000377798 DYNAPQ8N1N2 210 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 TEX45Q8NA69 505 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 TMED6Q8WW62 240 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 C1orf159Q96HA4 380 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 COMMD5Q9GZQ3 224 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 NAV2Q8IVL1 2488 aa11.89□□□□□ -0.51
POLR1E-202ENST00000377798 CSMD1Q96PZ7 3565 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 CENPVL3A0A0U1RRI6 287 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 C15orf62A8K5M9 175 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 PAX6P26367 422 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 CNTFRP26992 372 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 RPP30P78346 268 aaKnown RBP11.88□□□□□ -0.51
POLR1E-202ENST00000377798 Q5PR19 223 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 SLC7A5P1Q8MH63 180 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 PCNPQ8WW12 178 aaKnown RBP11.88□□□□□ -0.51
POLR1E-202ENST00000377798 C17orf50Q8WW18 174 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 MALSU1Q96EH3 234 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 GINS3Q9BRX5 216 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 SLC25A32Q9H2D1 315 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 ZNF430Q9H8G1 570 aaPredicted RBP11.88□□□□□ -0.51
POLR1E-202ENST00000377798 PLEKHA3Q9HB20 300 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 ENY2Q9NPA8 101 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 TPSG1Q9NRR2 321 aa11.88□□□□□ -0.51
POLR1E-202ENST00000377798 GCN1Q92616 2671 aaKnown RBP11.88□□□□□ -0.51
POLR1E-202ENST00000377798 PMS2P5A8MQ11 134 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 SCAF4O95104 1147 aaKnown RBP11.87□□□□□ -0.51
POLR1E-202ENST00000377798 IGKV1D-33P01593 117 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 IGKV1-33P01594 117 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 OPN1MWP04001 364 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 CRYGBP07316 175 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 NMBP08949 121 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 OPN1MW2P0DN77 364 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 OPN1MW3P0DN78 364 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 SAA4P35542 130 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 PSG5Q15238 335 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 OR8G2PQ6IF36 304 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 THNSL2Q86YJ6 484 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 LILRB2Q8N423 598 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 HINT2Q9BX68 163 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 AUP1Q9Y679 476 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 TRAV20A0A0B4J274 112 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 NPFFO15130 113 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 ATP6V1G1O75348 118 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 IFNA10P01566 189 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 LOXL1Q08397 574 aaPredicted RBP11.87□□□□□ -0.51
POLR1E-202ENST00000377798 SLC38A11Q08AI6 406 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 MRGPRG-AS1Q2M3A8 158 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 OR1L8Q8NGR8 309 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 AJUBAQ96IF1 538 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 NDUFA4L2Q9NRX3 87 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 SIGLEC9Q9Y336 463 aa11.87□□□□□ -0.51
POLR1E-202ENST00000377798 FBXO24O75426 580 aa11.86□□□□□ -0.51
POLR1E-202ENST00000377798 MOSP00540 346 aa11.86□□□□□ -0.51
POLR1E-202ENST00000377798 GATA3P23771 443 aa11.86□□□□□ -0.51
POLR1E-202ENST00000377798 PRSS57Q6UWY2 283 aa11.86□□□□□ -0.51
POLR1E-202ENST00000377798 MMD2Q8IY49 270 aa11.86□□□□□ -0.51
POLR1E-202ENST00000377798 LINC01356Q8N9X3 169 aa11.86□□□□□ -0.51
POLR1E-202ENST00000377798 HSD17B11Q8NBQ5 300 aa11.86□□□□□ -0.51
POLR1E-202ENST00000377798 OR10P1Q8NGE3 313 aa11.86□□□□□ -0.51
POLR1E-202ENST00000377798 PINX1Q96BK5 328 aaKnown RBP11.86□□□□□ -0.51
POLR1E-202ENST00000377798 HIF1ANQ9NWT6 349 aa11.86□□□□□ -0.51
POLR1E-202ENST00000377798 METTL1Q9UBP6 276 aaKnown RBP11.86□□□□□ -0.51
POLR1E-202ENST00000377798 CELSR1Q9NYQ6 3014 aa11.86□□□□□ -0.51
POLR1E-202ENST00000377798 OR8U8P0C7N1 319 aa11.85□□□□□ -0.51
POLR1E-202ENST00000377798 SEC11BP0C7V7 166 aa11.85□□□□□ -0.51
POLR1E-202ENST00000377798 SPP1P10451 314 aa11.85□□□□□ -0.51
POLR1E-202ENST00000377798 F2RL1P55085 397 aa11.85□□□□□ -0.51
POLR1E-202ENST00000377798 PJVKQ0ZLH3 352 aa11.85□□□□□ -0.51
POLR1E-202ENST00000377798 PRSS8Q16651 343 aa11.85□□□□□ -0.51
POLR1E-202ENST00000377798 PPP1R27Q86WC6 154 aa11.85□□□□□ -0.51
POLR1E-202ENST00000377798 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
POLR1E-202ENST00000377798 SLC24A4Q8NFF2 622 aa11.85□□□□□ -0.51
POLR1E-202ENST00000377798 OR2T10Q8NGZ9 312 aa11.85□□□□□ -0.51
POLR1E-202ENST00000377798 RNF141Q8WVD5 230 aa11.85□□□□□ -0.51
POLR1E-202ENST00000377798 EAF1Q96JC9 268 aaPredicted RBP11.85□□□□□ -0.51
POLR1E-202ENST00000377798 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.85□□□□□ -0.512e-7■■■■■ 69.6
POLR1E-202ENST00000377798 TRAV40A0A0B4J280 105 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms