RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 UPK2O00526 184 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 RBMXL2O75526 392 aaKnown RBP11.34□□□□□ -0.59
UBE4B-203ENST00000377153 DHFRP00374 187 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 APELAP0DMC3 54 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 ANXA3P12429 323 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 TPPP2P59282 170 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 SSBP2P81877 361 aaPredicted RBP11.34□□□□□ -0.59
UBE4B-203ENST00000377153 ZNF585BQ52M93 769 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 C10orf55Q5SWW7 151 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 THOC7Q6I9Y2 204 aaKnown RBP11.34□□□□□ -0.59
UBE4B-203ENST00000377153 LCNL1Q6ZST4 164 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 TMED4Q7Z7H5 227 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 SLC25A42Q86VD7 318 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 FAM110DQ8TAY7 271 aaPredicted RBP11.34□□□□□ -0.59
UBE4B-203ENST00000377153 UBE2E2Q96LR5 201 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 RTBDNQ9BSG5 229 aaPredicted RBP11.34□□□□□ -0.59
UBE4B-203ENST00000377153 FKBP11Q9NYL4 201 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 PRNDQ9UKY0 176 aa11.34□□□□□ -0.59
UBE4B-203ENST00000377153 LINC00854A0A1B0GVQ3 168 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 CRYM-AS1A6NIL9 109 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 ADARB2-AS1A8MUL3 147 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 TRGV3P03979 118 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 OR5AC1P0C628 307 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 OR9G9P0C7N8 305 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 AKR1C4P17516 323 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 UCP1P25874 307 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 CDX1P47902 265 aaPredicted RBP11.33□□□□□ -0.6
UBE4B-203ENST00000377153 RAB9AP51151 201 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 SRPXP78539 464 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 DHODHQ02127 395 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 MRGPRG-AS1Q2M3A8 158 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 MRPL41Q8IXM3 137 aaKnown RBP11.33□□□□□ -0.6
UBE4B-203ENST00000377153 CADM3Q8N126 398 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 OR5T1Q8NG75 326 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 OR4A16Q8NH70 328 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 C4orf3Q8WVX3 66 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 RRNAD1Q96FB5 475 aaKnown RBP11.33□□□□□ -0.6
UBE4B-203ENST00000377153 SDHCQ99643 169 aaPredicted RBP11.33□□□□□ -0.6
UBE4B-203ENST00000377153 TMEM222Q9H0R3 208 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 VSIG4Q9Y279 399 aa11.33□□□□□ -0.6
UBE4B-203ENST00000377153 SOX15O60248 233 aa11.32□□□□□ -0.6
UBE4B-203ENST00000377153 OR2B8PP59922 312 aa11.32□□□□□ -0.6
UBE4B-203ENST00000377153 ZNF846Q147U1 533 aa11.32□□□□□ -0.6
UBE4B-203ENST00000377153 SP6Q3SY56 376 aa11.32□□□□□ -0.6
UBE4B-203ENST00000377153 C8orf86Q6ZUL3 223 aa11.32□□□□□ -0.6
UBE4B-203ENST00000377153 HSD17B13Q7Z5P4 300 aaPredicted RBP11.32□□□□□ -0.6
UBE4B-203ENST00000377153 SEC22AQ96IW7 307 aa11.32□□□□□ -0.6
UBE4B-203ENST00000377153 MS4A10Q96PG2 267 aa11.32□□□□□ -0.6
UBE4B-203ENST00000377153 PDCD10Q9BUL8 212 aa11.32□□□□□ -0.6
UBE4B-203ENST00000377153 QTRT1Q9BXR0 403 aaKnown RBP11.32□□□□□ -0.6
UBE4B-203ENST00000377153 ZNF257Q9Y2Q1 563 aa11.32□□□□□ -0.6
UBE4B-203ENST00000377153 ANK2Q01484 3957 aa11.32□□□□□ -0.6
UBE4B-203ENST00000377153 DNHD1Q96M86 4753 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 A0A0G2JLM5 398 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 C13orf42A0A1B0GVH6 325 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 C15orf61A6NNL5 157 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 CYB5BO43169 146 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 VAMP1P23763 118 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 MECP2P51608 486 aaKnown RBP11.31□□□□□ -0.6
UBE4B-203ENST00000377153 CENPSQ8N2Z9 138 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 OR1L8Q8NGR8 309 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 OR5B3Q8NH48 314 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 MYOZ3Q8TDC0 251 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 CASTOR1Q8WTX7 329 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 RBPMSQ93062 196 aaKnown RBP11.31□□□□□ -0.6
UBE4B-203ENST00000377153 SRSF8Q9BRL6 282 aaKnown RBP11.31□□□□□ -0.6
UBE4B-203ENST00000377153 HINT2Q9BX68 163 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 KLK15Q9H2R5 256 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 OR51B2Q9Y5P1 312 aa11.31□□□□□ -0.6
UBE4B-203ENST00000377153 TRAV3A0A0B4J244 114 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 NPIPB5A8MRT5 1133 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 TEX22C9J3V5 150 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 LYRM1O43325 122 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 IGKV1-39P01597 117 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 IGKV1D-39P04432 117 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 IL6RP08887 468 aaPredicted RBP11.3□□□□□ -0.6
UBE4B-203ENST00000377153 DEFA4P12838 97 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 CCR6P51684 374 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 TMEM128Q5BJH2 165 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 ASPHD1Q5U4P2 390 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 TMEM268Q5VZI3 342 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 FAM219AQ8IW50 185 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 TTC9CQ8N5M4 171 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 ZNF491Q8N8L2 437 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 ADAD2Q8NCV1 583 aaKnown RBP11.3□□□□□ -0.6
UBE4B-203ENST00000377153 LSM10Q969L4 123 aaKnown RBP11.3□□□□□ -0.6
UBE4B-203ENST00000377153 GALNT14Q96FL9 552 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 TMEM56Q96MV1 263 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 NSG2Q9Y328 171 aa11.3□□□□□ -0.6
UBE4B-203ENST00000377153 HMX3A6NHT5 357 aa11.29□□□□□ -0.6
UBE4B-203ENST00000377153 FAM223BA6NKX1 122 aa11.29□□□□□ -0.6
UBE4B-203ENST00000377153 NDUFB6O95139 128 aa11.29□□□□□ -0.6
UBE4B-203ENST00000377153 BRI3O95415 125 aa11.29□□□□□ -0.6
UBE4B-203ENST00000377153 CDS2O95674 445 aa11.29□□□□□ -0.6
UBE4B-203ENST00000377153 LGALS1P09382 135 aaKnown RBP11.29□□□□□ -0.6
UBE4B-203ENST00000377153 TRAPPC2P0DI81 140 aa11.29□□□□□ -0.6
UBE4B-203ENST00000377153 TRAPPC2BP0DI82 140 aa11.29□□□□□ -0.6
UBE4B-203ENST00000377153 CD33P20138 364 aa11.29□□□□□ -0.6
UBE4B-203ENST00000377153 MYCNOSP40205 109 aa11.29□□□□□ -0.6
UBE4B-203ENST00000377153 RAB25P57735 213 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms