RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 TRAV1-1A0A0B4J248 108 aa13.64□□□□□ -0.23
HLA-A-202ENST00000376806 PRSS46E5RG02 174 aa13.64□□□□□ -0.23
HLA-A-202ENST00000376806 KBTBD11O94819 623 aa13.64□□□□□ -0.23
HLA-A-202ENST00000376806 IGFBP2P18065 325 aa13.64□□□□□ -0.23
HLA-A-202ENST00000376806 MDKP21741 143 aaPredicted RBP13.64□□□□□ -0.23
HLA-A-202ENST00000376806 DLX1P56177 255 aa13.64□□□□□ -0.23
HLA-A-202ENST00000376806 RAB2AP61019 212 aa13.64□□□□□ -0.23
HLA-A-202ENST00000376806 PRCDQ00LT1 54 aa13.64□□□□□ -0.23
HLA-A-202ENST00000376806 FLYWCH2Q96CP2 140 aaKnown RBP13.64□□□□□ -0.23
HLA-A-202ENST00000376806 RCC1LQ96I51 464 aaKnown RBP13.64□□□□□ -0.23
HLA-A-202ENST00000376806 NPCDR1Q9BY65 106 aa13.64□□□□□ -0.23
HLA-A-202ENST00000376806 WASHC3Q9Y3C0 194 aa13.64□□□□□ -0.23
HLA-A-202ENST00000376806 DCHS2Q6V1P9 2916 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 C22orf46C9J442 243 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 PLA2G2AP14555 144 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 RAB13P51153 203 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 RAB11AP62491 216 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 HNF4GQ14541 408 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 ZNF726P1Q15940 193 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 HLA-DRB5Q30154 266 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 ACSM6Q6P461 480 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 LY6G5BQ8NDX9 201 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 SLC24A4Q8NFF2 622 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 OR4C13Q8NGP0 309 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 LHX4Q969G2 390 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 CLEC7AQ9BXN2 247 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 KPTNQ9Y664 436 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 TNCP24821 2201 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 IGLV1-47P01700 117 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 LIPFP07098 398 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 NPY1RP25929 384 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 CDKN1AP38936 164 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 SSX7Q7RTT5 188 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 GGACTQ9BVM4 153 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 HINT2Q9BX68 163 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 PLEKHA3Q9HB20 300 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 PATZ1Q9HBE1 687 aaKnown RBP13.63□□□□□ -0.23
HLA-A-202ENST00000376806 FKBP11Q9NYL4 201 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 WDR83OSQ9Y284 106 aa13.63□□□□□ -0.23
HLA-A-202ENST00000376806 RBFOX3A6NFN3 312 aa13.62□□□□□ -0.23
HLA-A-202ENST00000376806 SNAPINO95295 136 aa13.62□□□□□ -0.23
HLA-A-202ENST00000376806 CD1BP29016 333 aa13.62□□□□□ -0.23
HLA-A-202ENST00000376806 PRRX1P54821 245 aa13.62□□□□□ -0.23
HLA-A-202ENST00000376806 DLK1P80370 383 aa13.62□□□□□ -0.23
HLA-A-202ENST00000376806 BEND2Q8NDZ0 799 aa13.62□□□□□ -0.23
HLA-A-202ENST00000376806 MBD3L1Q8WWY6 194 aa13.62□□□□□ -0.23
HLA-A-202ENST00000376806 RARRES2Q99969 163 aa13.62□□□□□ -0.23
HLA-A-202ENST00000376806 ONECUT1Q9UBC0 465 aa13.62□□□□□ -0.23
HLA-A-202ENST00000376806 TEX50A0A1B0GTY4 177 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 A6NNC1 897 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 IFNA4P05014 189 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 PRB3Q04118 309 aaPredicted RBP13.61□□□□□ -0.23
HLA-A-202ENST00000376806 ZNF787Q6DD87 383 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 ZNF709Q8N972 641 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 OR5B3Q8NH48 314 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 SMDT1Q9H4I9 107 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 TENM4Q6N022 2769 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 hCG_1809904A0A1W2PP81 198 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 A0A1W2PPE2 198 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 A0A1W2PR64 198 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 A0A1W2PRV1 198 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 SMCO3A2RU48 225 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 C17orf112F2Z3M2 114 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 DNASE2O00115 360 aaPredicted RBP13.61□□□□□ -0.23
HLA-A-202ENST00000376806 CA2P00918 260 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 IGKV1D-33P01593 117 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 IGKV1-33P01594 117 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 IGLV2-23P01705 113 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 USF1P22415 310 aaPredicted RBP13.61□□□□□ -0.23
HLA-A-202ENST00000376806 COX7A1P24310 79 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 MC5RP33032 325 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 NPBWR1P48145 328 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 FFAR4Q5NUL3 377 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 OR4A5Q8NH83 315 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 CLDND2Q8NHS1 167 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 VSTM2AQ8TAG5 236 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 TMEM167AQ8TBQ9 72 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 SLC35B3Q9H1N7 401 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 DOPEY1Q5JWR5 2465 aa13.61□□□□□ -0.23
HLA-A-202ENST00000376806 SPTAN1Q13813 2472 aaKnown RBP13.6□□□□□ -0.23
HLA-A-202ENST00000376806 FAM74A7A6NL05 159 aa13.6□□□□□ -0.23
HLA-A-202ENST00000376806 MBP02144 154 aa13.6□□□□□ -0.23
HLA-A-202ENST00000376806 OPN1MWP04001 364 aa13.6□□□□□ -0.23
HLA-A-202ENST00000376806 OPN1MW2P0DN77 364 aa13.6□□□□□ -0.23
HLA-A-202ENST00000376806 OPN1MW3P0DN78 364 aa13.6□□□□□ -0.23
HLA-A-202ENST00000376806 RPL8P62917 257 aaKnown RBP13.6□□□□□ -0.23
HLA-A-202ENST00000376806 HAGHQ16775 308 aa13.6□□□□□ -0.23
HLA-A-202ENST00000376806 FAM74A3Q4VXF1 159 aa13.6□□□□□ -0.23
HLA-A-202ENST00000376806 ZNF506Q5JVG8 444 aa13.6□□□□□ -0.23
HLA-A-202ENST00000376806 LCN15Q6UWW0 184 aa13.6□□□□□ -0.23
HLA-A-202ENST00000376806 Q8N7P7 452 aa13.6□□□□□ -0.23
HLA-A-202ENST00000376806 SSBP3Q9BWW4 388 aaPredicted RBP13.6□□□□□ -0.23
HLA-A-202ENST00000376806 LRRK2Q5S007 2527 aa13.6□□□□□ -0.23
HLA-A-202ENST00000376806 MAP1LC3B2A6NCE7 125 aa13.59□□□□□ -0.23
HLA-A-202ENST00000376806 BUB1B-PAK6H3BSN5 160 aa13.59□□□□□ -0.23
HLA-A-202ENST00000376806 MPDU1O75352 247 aa13.59□□□□□ -0.23
HLA-A-202ENST00000376806 GPR6P46095 362 aaPredicted RBP13.59□□□□□ -0.23
HLA-A-202ENST00000376806 ICAM4Q14773 271 aa13.59□□□□□ -0.23
HLA-A-202ENST00000376806 TREML4Q6UXN2 200 aa13.59□□□□□ -0.23
HLA-A-202ENST00000376806 RPP25LQ8N5L8 163 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms