RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 TMEM56Q96MV1 263 aa9.27□□□□□ -0.93
HDAC6-203ENST00000376619 GAR1Q9NY12 217 aaKnown RBP9.27□□□□□ -0.93
HDAC6-203ENST00000376619 TMEM56-RWDD3S4R434 201 aa9.27□□□□□ -0.93
HDAC6-203ENST00000376619 ZNF462Q96JM2 2506 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 TMSB15BA0A087X1C1 80 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 SAA2-SAA4A0A096LPE2 208 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-203ENST00000376619 CA2P00918 260 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 IGHV3-23P01764 117 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 MBP02144 154 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 SAA2P0DJI9 122 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-203ENST00000376619 C16orf82Q7Z2V1 217 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 OR4X1Q8NH49 305 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 IL22RA2Q969J5 263 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 WDR61Q9GZS3 305 aaKnown RBP9.26□□□□□ -0.93
HDAC6-203ENST00000376619 PLSCR2Q9NRY7 297 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 ZDHHC8Q9ULC8 765 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 KALRNO60229 2985 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 IGKV1D-17A0A075B6S4 117 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 MUC15Q8N387 334 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 FLNBO75369 2602 aaKnown RBP9.26□□□□□ -0.93
HDAC6-203ENST00000376619 ZNF98A6NK75 572 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 IGHV1-46P01743 117 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 IL3RAP26951 378 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 SLC35E4Q6ICL7 350 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 TRAT1Q6PIZ9 186 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 TEPPQ6URK8 271 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 LINC00596Q86U02 117 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 ZNF525Q8N782 197 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 NPIPB3Q92617 1050 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 CTDSP1Q9GZU7 261 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 TOLLIPQ9H0E2 274 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 ATPIF1Q9UII2 106 aa9.26□□□□□ -0.93
HDAC6-203ENST00000376619 FN1P02751 2386 aaKnown RBP9.25□□□□□ -0.93
HDAC6-203ENST00000376619 BTBD17A6NE02 478 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 IGFBP2P18065 325 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 VMA21Q3ZAQ7 101 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 MORN2Q502X0 79 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 ZNF585BQ52M93 769 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 NMSQ5H8A3 153 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 LEMD1Q68G75 181 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 MRGPRGQ86SM5 289 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 C15orf54Q8N8G6 183 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 SGMS2Q8NHU3 365 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 GINS3Q9BRX5 216 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 TMUB1Q9BVT8 246 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 IGHV3-49A0A0A0MS15 119 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 TRAV34A0A0B4J273 112 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 A0A0G2JNJ9 132 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 XKRY2A2RUG3 117 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 PMCHP20382 165 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 RND2P52198 227 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 SUB1P53999 127 aaKnown RBP eCLIP9.25□□□□□ -0.937e-9■■■□□ 16.5
HDAC6-203ENST00000376619 MST1LQ2TV78 715 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 NRN1LQ496H8 165 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 KRTCAP3Q53RY4 240 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 OR4A47Q6IF82 309 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 SSBP3Q9BWW4 388 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-203ENST00000376619 MRPL20Q9BYC9 149 aaKnown RBP9.25□□□□□ -0.93
HDAC6-203ENST00000376619 RYDENQ9NUL5 291 aaKnown RBP9.25□□□□□ -0.93
HDAC6-203ENST00000376619 Q9UFV3 132 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 CTXND1A0A1B0GTU2 59 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 MMP23AO75900 390 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 TCTAP57738 103 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 Q6ZPA2 131 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 RNF138Q8WVD3 245 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 PARLQ9H300 379 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 SRD5A3Q9H8P0 318 aa9.25□□□□□ -0.93
HDAC6-203ENST00000376619 SLC17A3O00476 420 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 FGF16O43320 207 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 IGKV1-39P01597 117 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 IGKV1-16P04430 117 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 IGKV1D-39P04432 117 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 SLC25A5P05141 298 aaKnown RBP9.24□□□□□ -0.93
HDAC6-203ENST00000376619 PMS2P11Q13670 270 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 TRAPPC1Q9Y5R8 145 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 SLC25A15Q9Y619 301 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 CRYBB3P26998 211 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 RHOBP62745 196 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 LYPD2Q6UXB3 125 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 PNKDQ8N490 385 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 RPP25LQ8N5L8 163 aaKnown RBP9.24□□□□□ -0.93
HDAC6-203ENST00000376619 OR2T6Q8NHC8 308 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 MIOXQ9UGB7 285 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 NAT8BQ9UHF3 227 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 GRIFINA4D1Z8 144 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 TNFSF13O75888 250 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 TMPRSS3P57727 454 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 C19orf35Q6ZS72 473 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 FAM222BQ8WU58 562 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 DERL1Q9BUN8 251 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 GSX1Q9H4S2 264 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-203ENST00000376619 NPVFQ9HCQ7 196 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 PLSCR4Q9NRQ2 329 aa9.24□□□□□ -0.93
HDAC6-203ENST00000376619 CSN3P07498 182 aa9.23□□□□□ -0.93
HDAC6-203ENST00000376619 LINC00869P0C866 280 aa9.23□□□□□ -0.93
HDAC6-203ENST00000376619 GRNP28799 593 aaKnown RBP9.23□□□□□ -0.93
HDAC6-203ENST00000376619 OR5I1Q13606 314 aa9.23□□□□□ -0.93
HDAC6-203ENST00000376619 CRIP3Q6Q6R5 217 aa9.23□□□□□ -0.93
HDAC6-203ENST00000376619 OR1L4Q8NGR5 311 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms