RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SPCS3P61009 180 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 UBE2L3P68036 154 aaKnown RBP12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 FAM19A2Q8N3H0 131 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 SLC24A4Q8NFF2 622 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 OCC1Q8TAD7 63 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 SFRP2Q96HF1 295 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 SH2D2AQ9NP31 389 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 DYNLRB1Q9NP97 96 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 MLNRO43193 412 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 COQ2Q96H96 371 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 MRPL18Q9H0U6 180 aaKnown RBP12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 RNASE7Q9H1E1 156 aaKnown RBP12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ZNF586Q9NXT0 402 aa12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 RALYQ9UKM9 306 aaKnown RBP12□□□□□ -0.49
TNFRSF1B-201ENST00000376259 FOXH1O75593 365 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 GZMBP10144 247 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TNFSF4P23510 183 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 KLF3P57682 345 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 RANP62826 216 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TNFAIP6P98066 277 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TRIP6Q15654 476 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 WDR82Q6UXN9 313 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 STPG3Q8N7X2 389 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 KDF1Q8NAX2 398 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 SEPSECSQ9HD40 501 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 NAGKQ9UJ70 344 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ZNF835Q9Y2P0 537 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 LRP4O75096 1905 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 A6NNC1 897 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TMEM250H0YL14 139 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 HSBP1O75506 76 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 CEACAM1P13688 526 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 RNASEKQ6P5S7 137 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 C9orf106Q8NAJ2 232 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 OR4S2Q8NH73 311 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 SLC35E1Q96K37 410 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 HOXB1P14653 301 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 MIR17HGQ75NE6 70 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 FAM216BQ8N7L0 139 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 OR5B3Q8NH48 314 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 NPVFQ9HCQ7 196 aa11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TECRQ9NZ01 308 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TANC2Q9HCD6 1990 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 IGKV3D-15A0A087WSY6 115 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 M0R143 59 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 RAB29O14966 203 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 CA2P00918 260 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 CSN3P07498 182 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ZNF137PP52743 207 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 HCP5Q6MZN7 132 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ST6GALNAC3Q8NDV1 305 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 OR5AU1Q8NGC0 362 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TMEM68Q96MH6 324 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 WNT10AQ9GZT5 417 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 PRDM13Q9H4Q3 707 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 SLC31A2O15432 143 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 PDE6DO43924 150 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 COX7A2P2O60397 106 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 HPRT1P00492 218 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 INO80CQ6PI98 192 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 HSPB7Q9UBY9 170 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 OTOGLQ3ZCN5 2332 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 LAMA5O15230 3695 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TRBV24-1A0A075B6N3 115 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 C21orf140B9A014 251 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 CXorf1O96002 111 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TMEM11P17152 192 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 CHRNB4P30926 498 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ADMP35318 185 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 UBE2G1P62253 170 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TMEM14EPQ6UXP3 125 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ERASQ7Z444 233 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 SNRNP40Q96DI7 357 aaKnown RBP11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 CALYQ9NYX4 217 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 SSUH2Q9Y2M2 353 aa11.98□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TFPI2P48307 235 aa11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 OR51B2Q9Y5P1 312 aa11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 CYC1P08574 325 aa11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 IL6RP08887 468 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 RTL8BQ17RB0 113 aa11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 RPEL1Q2QD12 228 aa11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 BHLHA15Q7RTS1 189 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 HARBI1Q96MB7 349 aa11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 JOSD1Q15040 202 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 LINC01551Q86U37 167 aa11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 OR2D3Q8NGH3 330 aa11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 DAZAP1Q96EP5 407 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 ZNF71Q9NQZ8 489 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF1B-201ENST00000376259 TRAV17A0A0B4J275 112 aa11.96□□□□□ -0.49
TNFRSF1B-201ENST00000376259 EREGO14944 169 aa11.96□□□□□ -0.49
TNFRSF1B-201ENST00000376259 SERF1AO75920 110 aa11.96□□□□□ -0.49
TNFRSF1B-201ENST00000376259 APOA2P02652 100 aa11.96□□□□□ -0.49
TNFRSF1B-201ENST00000376259 GCHFRP30047 84 aa11.96□□□□□ -0.49
TNFRSF1B-201ENST00000376259 MFAP2P55001 183 aa11.96□□□□□ -0.49
TNFRSF1B-201ENST00000376259 MZT1Q08AG7 82 aa11.96□□□□□ -0.49
TNFRSF1B-201ENST00000376259 HLA-DRB5Q30154 266 aa11.96□□□□□ -0.49
TNFRSF1B-201ENST00000376259 DUX4L9Q6RFH8 374 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF1B-201ENST00000376259 Q6ZR03 302 aa11.96□□□□□ -0.49
TNFRSF1B-201ENST00000376259 MGAQ8IWI9 3026 aa11.96□□□□□ -0.49
TNFRSF1B-201ENST00000376259 FAM90A26D6RGX4 464 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms