RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 OR7C1O76099 320 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-203ENST00000375315 NTF3P20783 257 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 FOXG1P55316 489 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-203ENST00000375315 PDCD1Q15116 288 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 RPEL1Q2QD12 228 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 COX19Q49B96 90 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 Q6ZSR3 168 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 OR51H1Q8NH63 302 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 TMEM147Q9BVK8 224 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 WASHC3Q9Y3C0 194 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 SPTAN1Q13813 2472 aaKnown RBP10.18□□□□□ -0.78
C9orf3-203ENST00000375315 M0R1X1 148 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 OR7C2O60412 319 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 RAC3P60763 192 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 ARF1P84077 181 aaKnown RBP10.18□□□□□ -0.78
C9orf3-203ENST00000375315 MPV17L2Q567V2 206 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 Q6ZRM9 215 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 Q6ZS49 121 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 DEFB125Q8N687 156 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 GJC3Q8NFK1 279 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 TXNDC17Q9BRA2 123 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 KLF13Q9Y2Y9 288 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-203ENST00000375315 ZGRF1Q86YA3 2104 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 GTF3C1Q12789 2109 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 J3QR06 171 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 PSG2P11465 335 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 PAX2Q02962 417 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 OR1K1Q8NGR3 316 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 OR4S2Q8NH73 311 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 CLUHP3Q96NS8 147 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 CLEC7AQ9BXN2 247 aa10.18□□□□□ -0.78
C9orf3-203ENST00000375315 IGKV1-27A0A075B6S5 117 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 TUSC2O75896 110 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 IGLL1P15814 213 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 PLA2G5P39877 138 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 LCN12Q6JVE5 192 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 RCHY1Q96PM5 261 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 KIR2DS1A0A191URI9 304 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 GJE1A6NN92 205 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 M0R135 149 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 SLC17A3O00476 420 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 CLDN1O95832 211 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 SCTP09683 121 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 KIR2DS4P43632 304 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 RBM11P57052 281 aaKnown RBP10.17□□□□□ -0.78
C9orf3-203ENST00000375315 KIR2DS1Q14954 304 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 CEACAM16Q2WEN9 425 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 C12orf54Q6X4T0 127 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 OCC1Q8TAD7 63 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 ZNF799Q96GE5 643 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 SF3B5Q9BWJ5 86 aaKnown RBP10.17□□□□□ -0.78
C9orf3-203ENST00000375315 PLEK2Q9NYT0 353 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 PTPRBP23467 1997 aa10.17□□□□□ -0.78
C9orf3-203ENST00000375315 IGKV1-12A0A0C4DH73 117 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 IGKV1D-12P01611 117 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 CCL2P13500 99 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 TCF24Q7RTU0 167 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 MMD2Q8IY49 270 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 FAM19A2Q8N3H0 131 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 TRBV20OR9-2A0A075B6H5 130 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 MRPL33O75394 65 aaKnown RBP10.16□□□□□ -0.78
C9orf3-203ENST00000375315 SAP30O75446 220 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 NUDT3O95989 172 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 PSG9Q00887 426 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 RELBQ01201 579 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 RBPJQ06330 500 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 SRSF7Q16629 238 aaKnown RBP eCLIP10.16□□□□□ -0.782e-7■■■■■ 30.9
C9orf3-203ENST00000375315 TMEM14EPQ6UXP3 125 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 ZDHHC23Q8IYP9 409 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 RDH5Q92781 318 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 PEF1Q9UBV8 284 aaKnown RBP10.16□□□□□ -0.78
C9orf3-203ENST00000375315 CADP27708 2225 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 TRGV5A0A0B4J1U4 118 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 DHHO43323 396 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 KIAA1644Q3SXP7 199 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 Q56UQ5 140 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 WFDC8Q8IUA0 241 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 TMEM178AQ8NBL3 297 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 TSKUQ8WUA8 353 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 SPTSSAQ969W0 71 aa10.16□□□□□ -0.78
C9orf3-203ENST00000375315 H0YJW9 148 aa10.15□□□□□ -0.78
C9orf3-203ENST00000375315 SRIP30626 198 aa10.15□□□□□ -0.78
C9orf3-203ENST00000375315 FUT6P51993 359 aa10.15□□□□□ -0.78
C9orf3-203ENST00000375315 BVES-AS1Q5T3Y7 98 aa10.15□□□□□ -0.78
C9orf3-203ENST00000375315 SAMD13Q5VXD3 122 aa10.15□□□□□ -0.78
C9orf3-203ENST00000375315 ST6GALNAC3Q8NDV1 305 aa10.15□□□□□ -0.78
C9orf3-203ENST00000375315 MDS2Q8NDY4 140 aa10.15□□□□□ -0.78
C9orf3-203ENST00000375315 LRP5LA4QPB2 252 aa10.15□□□□□ -0.79
C9orf3-203ENST00000375315 G3V4G9 280 aa10.15□□□□□ -0.79
C9orf3-203ENST00000375315 LINC00869P0C866 280 aa10.15□□□□□ -0.79
C9orf3-203ENST00000375315 OR8I2Q8N0Y5 310 aa10.15□□□□□ -0.79
C9orf3-203ENST00000375315 CNEP1R1Q8N9A8 125 aa10.15□□□□□ -0.79
C9orf3-203ENST00000375315 FER1L6-AS1Q8NA97 138 aa10.15□□□□□ -0.79
C9orf3-203ENST00000375315 SPRR3Q9UBC9 169 aa10.15□□□□□ -0.79
C9orf3-203ENST00000375315 A0A1W2PPV4 95 aa10.14□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A26D6RGX4 464 aa10.14□□□□□ -0.79
C9orf3-203ENST00000375315 CD5LO43866 347 aa10.14□□□□□ -0.79
C9orf3-203ENST00000375315 TMEM249Q2WGJ8 235 aa10.14□□□□□ -0.79
C9orf3-203ENST00000375315 NINJ1Q92982 152 aa10.14□□□□□ -0.79
C9orf3-203ENST00000375315 TMEM186Q96B77 213 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms