RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ZNF502Q8TBZ5 544 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 ELOVL5Q9NYP7 299 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 TRBV6-6A0A0A6YYG2 114 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 TIMP3P35625 211 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 C2orf83Q53S99 150 aa8.68□□□□□ -1.02
PTCH1-204ENST00000375290 SSBP4Q9BWG4 385 aaPredicted RBP8.68□□□□□ -1.02
PTCH1-204ENST00000375290 hCG_38984A0A1B0GV85 526 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 TDHQ8IZJ6 230 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 HDHD3Q9BSH5 251 aaPredicted RBP8.67□□□□□ -1.02
PTCH1-204ENST00000375290 TP53BP1Q12888 1972 aaPredicted RBP8.67□□□□□ -1.02
PTCH1-204ENST00000375290 XIRP1Q702N8 1843 aaKnown RBP8.67□□□□□ -1.02
PTCH1-204ENST00000375290 CD3EP07766 207 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 RTN4RL2Q86UN3 420 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 NUDT10Q8NFP7 164 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 WNT2BQ93097 391 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 FSCN3Q9NQT6 498 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.67□□□□□ -1.02
PTCH1-204ENST00000375290 ZG16O60844 167 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 SERF1AO75920 110 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 OR2K2Q8NGT1 345 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 SLC25A28Q96A46 364 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 IDI2-AS1Q9NZ38 188 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 IGHV3-43A0A0B4J1X8 118 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 IGHV3-43DP0DP04 118 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 TEX38Q6PEX7 206 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 CACNG7P62955 275 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 IGHV1-45A0A0A0MS14 117 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 A0A1B0GWB2 263 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 A0A1W2PP11 408 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 MMDQ15546 238 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 DRAM1Q8N682 238 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 TNFRSF14Q92956 283 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 F2RL2O00254 374 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 TRGV8A0A0C4DH27 118 aa8.67□□□□□ -1.02
PTCH1-204ENST00000375290 CABIN1Q9Y6J0 2220 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 UQCRFS1P47985 274 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 MUC15Q8N387 334 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 TINAGQ9UJW2 476 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 DTX4Q9Y2E6 619 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 CD40P25942 277 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 CXorf67Q86X51 503 aaPredicted RBP8.66□□□□□ -1.02
PTCH1-204ENST00000375290 GDF15Q99988 308 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 GREM1O60565 184 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 GPR6P46095 362 aaPredicted RBP8.66□□□□□ -1.02
PTCH1-204ENST00000375290 S100A7L2Q5SY68 101 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 EAF1Q96JC9 268 aaPredicted RBP8.66□□□□□ -1.02
PTCH1-204ENST00000375290 ASCL2Q99929 193 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 PLXNA3P51805 1871 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 ITGB1BP1O14713 200 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 MOGAT3Q86VF5 341 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 DOCK6Q96HP0 2047 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 NPIPB11E5RHQ5 1161 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 TSPAN13O95857 204 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 SNAI3Q3KNW1 292 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 NBEAP1P0C6P0 100 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 YPEL1O60688 119 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 SIGLEC14Q08ET2 396 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 YPEL2Q96QA6 119 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 SLC50A1Q9BRV3 221 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 DLX6P56179 175 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 AMELYQ99218 206 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 OTORQ9NRC9 128 aa8.66□□□□□ -1.02
PTCH1-204ENST00000375290 MSGN1A6NI15 193 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 HIGD1CA8MV81 97 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 IL6RP08887 468 aaPredicted RBP8.65□□□□□ -1.02
PTCH1-204ENST00000375290 ZNF83P51522 516 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 EBLN2Q6P2I7 272 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 CENPVL1A0A0U1RR11 272 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 GRIFINA4D1Z8 144 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 Q0VG73 95 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 REPIN1Q9BWE0 567 aaKnown RBP8.65□□□□□ -1.02
PTCH1-204ENST00000375290 C15orf61A6NNL5 157 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 A8MWP6 167 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 PVRIGQ6DKI7 326 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 LDLRAD4O15165 306 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 RAMP1O60894 148 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 IGHV2-70P01814 119 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 ZNF318Q5VUA4 2279 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 ZNF385AQ96PM9 386 aaKnown RBP8.65□□□□□ -1.02
PTCH1-204ENST00000375290 WNT5BQ9H1J7 359 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 REG1AP05451 166 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 SPINK9Q5DT21 86 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 SRSF12Q8WXF0 261 aaKnown RBP8.65□□□□□ -1.02
PTCH1-204ENST00000375290 IFI27L2Q9H2X8 130 aa8.65□□□□□ -1.02
PTCH1-204ENST00000375290 LYZL6O75951 148 aa8.65□□□□□ -1.03
PTCH1-204ENST00000375290 OR9G9P0C7N8 305 aa8.65□□□□□ -1.03
PTCH1-204ENST00000375290 ATRAIDQ6UW56 229 aa8.65□□□□□ -1.03
PTCH1-204ENST00000375290 LYPD1Q8N2G4 141 aa8.65□□□□□ -1.03
PTCH1-204ENST00000375290 FAM71F2Q6NXP2 309 aa8.65□□□□□ -1.03
PTCH1-204ENST00000375290 TMUB1Q9BVT8 246 aa8.65□□□□□ -1.03
PTCH1-204ENST00000375290 A0A0J9YW62 118 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 SYNGR3O43761 229 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 AMBPP02760 352 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 CCL17Q92583 94 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 RTN4RQ9BZR6 473 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.64□□□□□ -1.03
PTCH1-204ENST00000375290 C3orf80F5H4A9 247 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 ZNF137PP52743 207 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 PLNP26678 52 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms