RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 TAS2R8Q9NYW2 309 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 KCNK7Q9Y2U2 307 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 RAB6AP20340 208 aa10.48□□□□□ -0.73
PTCH1-202ENST00000375271 Q6ZS49 121 aa10.48□□□□□ -0.73
PTCH1-202ENST00000375271 PUSL1Q8N0Z8 303 aaKnown RBP10.48□□□□□ -0.73
PTCH1-202ENST00000375271 OR4A5Q8NH83 315 aa10.48□□□□□ -0.73
PTCH1-202ENST00000375271 GATAD1Q8WUU5 269 aa10.48□□□□□ -0.73
PTCH1-202ENST00000375271 LSM2Q9Y333 95 aaKnown RBP10.48□□□□□ -0.73
PTCH1-202ENST00000375271 TPRKBQ9Y3C4 175 aa10.48□□□□□ -0.73
PTCH1-202ENST00000375271 KMT2AQ03164 3969 aa10.48□□□□□ -0.73
PTCH1-202ENST00000375271 IGLV11-55A0A075B6I3 123 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 TGOLN2O43493 480 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 C8orf88P0DMB2 117 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 RPA2P15927 270 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 CMC4P56277 68 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-202ENST00000375271 RPL30P62888 115 aaKnown RBP10.47□□□□□ -0.73
PTCH1-202ENST00000375271 RCN1Q15293 331 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 LAIR2Q6ISS4 152 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 ZNF66Q6ZN08 573 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 TMEM91Q6ZNR0 172 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 C2CD4CQ8TF44 421 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 TMEM190Q8WZ59 177 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 CMTM3Q96MX0 182 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 RARRES2Q99969 163 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 MAP6D1Q9H9H5 199 aa10.47□□□□□ -0.73
PTCH1-202ENST00000375271 MPTX1A8MV57 137 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 RGS10O43665 173 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 HLA-DQB1P01920 261 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 PTBP1P26599 531 aaKnown RBP eCLIP10.46□□□□□ -0.733e-8■■■■□ 20.8
PTCH1-202ENST00000375271 TCTAP57738 103 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 GNG2P59768 71 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 ARPC4P59998 168 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 MLLT11Q13015 90 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-202ENST00000375271 PLA2G7Q13093 441 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 CATR1Q13166 79 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 MFSD4AQ8N468 514 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 UBAC2Q8NBM4 344 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 ZNF502Q8TBZ5 544 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 CD300LFQ8TDQ1 290 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 CSTL1Q9H114 145 aa10.46□□□□□ -0.73
PTCH1-202ENST00000375271 HERC2O95714 4834 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 OR2T8A6NH00 312 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 IFITM5A6NNB3 132 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 E7EUB6 86 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 EBAG9O00559 213 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 CASQ2O14958 399 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-202ENST00000375271 TNFSF12O43508 249 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 RAB3BP20337 219 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 FCGR2BP31994 310 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-202ENST00000375271 NANOS2P60321 138 aaKnown RBP10.45□□□□□ -0.74
PTCH1-202ENST00000375271 FABP5Q01469 135 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 ODF3L2Q3SX64 289 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 TIMM50Q3ZCQ8 353 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 CDNFQ49AH0 187 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 SLC25A24Q6NUK1 477 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 CNIH2Q6PI25 160 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 SPSB3Q6PJ21 355 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 SPAG16Q8N0X2 631 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 DMBX1Q8NFW5 382 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 VN1R17PQ8TDU5 208 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 BSCL2Q96G97 398 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-202ENST00000375271 ZNF436Q9C0F3 470 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-202ENST00000375271 DCSTAMPQ9H295 470 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 BET1LQ9NYM9 111 aa10.45□□□□□ -0.74
PTCH1-202ENST00000375271 IGKV1D-8A0A087WSZ0 117 aa10.44□□□□□ -0.74
PTCH1-202ENST00000375271 NDUFA4O00483 81 aa10.44□□□□□ -0.74
PTCH1-202ENST00000375271 SCGNO76038 276 aa10.44□□□□□ -0.74
PTCH1-202ENST00000375271 CTSDP07339 412 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-202ENST00000375271 NQO2P16083 231 aa10.44□□□□□ -0.74
PTCH1-202ENST00000375271 ERVK-16P61578 105 aa10.44□□□□□ -0.74
PTCH1-202ENST00000375271 Q56UQ5 140 aa10.44□□□□□ -0.74
PTCH1-202ENST00000375271 HACD4Q5VWC8 232 aa10.44□□□□□ -0.74
PTCH1-202ENST00000375271 THOC7Q6I9Y2 204 aaKnown RBP10.44□□□□□ -0.74
PTCH1-202ENST00000375271 OR11H2Q8NH07 326 aa10.44□□□□□ -0.74
PTCH1-202ENST00000375271 SECTM1Q8WVN6 248 aa10.44□□□□□ -0.74
PTCH1-202ENST00000375271 SRSF8Q9BRL6 282 aaKnown RBP10.44□□□□□ -0.74
PTCH1-202ENST00000375271 QTRT1Q9BXR0 403 aaKnown RBP10.44□□□□□ -0.74
PTCH1-202ENST00000375271 IGKV1D-13A0A0B4J2D9 117 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 ZNF207O43670 478 aaKnown RBP10.43□□□□□ -0.74
PTCH1-202ENST00000375271 MRPS14O60783 128 aaKnown RBP10.43□□□□□ -0.74
PTCH1-202ENST00000375271 YIF1AO95070 293 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 EIF4EP06730 217 aaKnown RBP10.43□□□□□ -0.74
PTCH1-202ENST00000375271 IGKV1-13P0DP09 117 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 TFPI2P48307 235 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 OR10A3P58181 314 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 TAS2R31P59538 309 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 OR2B8PP59922 312 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 PAFAH1B2P68402 229 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 HSD17B13Q7Z5P4 300 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-202ENST00000375271 APRG1Q8IVJ8 170 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 GDPD1Q8N9F7 314 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 NUDCD2Q8WVJ2 157 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 MGLLQ99685 303 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 HINT2Q9BX68 163 aa10.43□□□□□ -0.74
PTCH1-202ENST00000375271 C11orf68Q9H3H3 251 aaKnown RBP10.43□□□□□ -0.74
PTCH1-202ENST00000375271 IGKV3-7A0A075B6H7 116 aa10.42□□□□□ -0.74
PTCH1-202ENST00000375271 TRAV1-2A0A0B4J238 106 aa10.42□□□□□ -0.74
PTCH1-202ENST00000375271 A0A1B0GW64 132 aa10.42□□□□□ -0.74
PTCH1-202ENST00000375271 IGLL5B9A064 214 aa10.42□□□□□ -0.74
PTCH1-202ENST00000375271 XRCC3O43542 346 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms