RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 MOSP00540 346 aa16.88■□□□□ 0.29
COL15A1-201ENST00000375001 ADMP35318 185 aa16.88■□□□□ 0.29
COL15A1-201ENST00000375001 C1orf185Q5T7R7 199 aa16.88■□□□□ 0.29
COL15A1-201ENST00000375001 OR2K2Q8NGT1 345 aa16.88■□□□□ 0.29
COL15A1-201ENST00000375001 CDX4O14627 284 aaPredicted RBP16.88■□□□□ 0.29
COL15A1-201ENST00000375001 KCNK17Q96T54 332 aa16.88■□□□□ 0.29
COL15A1-201ENST00000375001 COL5A3P25940 1745 aaPredicted RBP16.88■□□□□ 0.29
COL15A1-201ENST00000375001 UCP3P55916 312 aa16.88■□□□□ 0.29
COL15A1-201ENST00000375001 A0A1B0GUT8 65 aa16.87■□□□□ 0.29
COL15A1-201ENST00000375001 IGHV4-39P01824 125 aa16.87■□□□□ 0.29
COL15A1-201ENST00000375001 UBALD2Q8IYN6 164 aa16.87■□□□□ 0.29
COL15A1-201ENST00000375001 SSBP4Q9BWG4 385 aaPredicted RBP16.87■□□□□ 0.29
COL15A1-201ENST00000375001 UCP2P55851 309 aa16.87■□□□□ 0.29
COL15A1-201ENST00000375001 RPL23P62829 140 aaKnown RBP16.87■□□□□ 0.29
COL15A1-201ENST00000375001 ICAM4Q14773 271 aa16.87■□□□□ 0.29
COL15A1-201ENST00000375001 PEAR1Q5VY43 1037 aaPredicted RBP16.87■□□□□ 0.29
COL15A1-201ENST00000375001 TRAV9-2A0A087WT02 112 aa16.87■□□□□ 0.29
COL15A1-201ENST00000375001 TMEM14DPA8MWL7 114 aa16.87■□□□□ 0.29
COL15A1-201ENST00000375001 hCG_38984A0A1B0GV85 526 aa16.87■□□□□ 0.29
COL15A1-201ENST00000375001 PF4V1P10720 104 aa16.87■□□□□ 0.29
COL15A1-201ENST00000375001 LHFPL6Q9Y693 200 aa16.87■□□□□ 0.29
COL15A1-201ENST00000375001 NDUFS6O75380 124 aaKnown RBP16.86■□□□□ 0.29
COL15A1-201ENST00000375001 TFF3Q07654 80 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 LURAP1LQ8IV03 231 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 DRAM1Q8N682 238 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 DNASE2BQ8WZ79 361 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 NPFFR1Q9GZQ6 430 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 ZNF71Q9NQZ8 489 aaPredicted RBP16.86■□□□□ 0.29
COL15A1-201ENST00000375001 PGPEP1Q9NXJ5 209 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 CALYQ9NYX4 217 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 ODAMA1E959 279 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 LINC01590Q5TEZ4 76 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 UNQ5815/PRO19632Q6UWF5 114 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 G6PC2Q9NQR9 355 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 TRAV14DV4A0A0A6YYC5 116 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 LRTM2Q8N967 370 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 POLR2AP24928 1970 aaKnown RBP16.86■□□□□ 0.29
COL15A1-201ENST00000375001 RNASEH2CQ8TDP1 164 aaKnown RBP16.86■□□□□ 0.29
COL15A1-201ENST00000375001 HIST1H2BLQ99880 126 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 M0R381 172 aa16.86■□□□□ 0.29
COL15A1-201ENST00000375001 IGHV3-35A0A0C4DH35 117 aa16.85■□□□□ 0.29
COL15A1-201ENST00000375001 THY1P04216 161 aa16.85■□□□□ 0.29
COL15A1-201ENST00000375001 C19orf48Q6RUI8 117 aa16.85■□□□□ 0.29
COL15A1-201ENST00000375001 WNT9BO14905 357 aa16.85■□□□□ 0.29
COL15A1-201ENST00000375001 SLC25A47Q6Q0C1 308 aa16.85■□□□□ 0.29
COL15A1-201ENST00000375001 C1orf53Q5VUE5 145 aa16.85■□□□□ 0.29
COL15A1-201ENST00000375001 SELENOKQ9Y6D0 94 aa16.85■□□□□ 0.29
COL15A1-201ENST00000375001 STRCP1A6NGW2 1772 aa16.85■□□□□ 0.29
COL15A1-201ENST00000375001 NPIPB4C9JG80 1138 aa16.85■□□□□ 0.29
COL15A1-201ENST00000375001 DLEU1O43261 78 aa16.85■□□□□ 0.29
COL15A1-201ENST00000375001 SRSF4Q08170 494 aaKnown RBP16.85■□□□□ 0.29
COL15A1-201ENST00000375001 TIMM23BQ5SRD1 257 aa16.85■□□□□ 0.29
COL15A1-201ENST00000375001 WDR82Q6UXN9 313 aa16.85■□□□□ 0.29
COL15A1-201ENST00000375001 IGKV1D-42A0A075B6H8 117 aa16.84■□□□□ 0.29
COL15A1-201ENST00000375001 C9JCJ5 164 aa16.84■□□□□ 0.29
COL15A1-201ENST00000375001 ORAOV1Q8WV07 137 aa16.84■□□□□ 0.29
COL15A1-201ENST00000375001 ATAD5Q96QE3 1844 aa16.84■□□□□ 0.29
COL15A1-201ENST00000375001 TMEM262E9PQX1 116 aa16.84■□□□□ 0.29
COL15A1-201ENST00000375001 NUTF2P61970 127 aaKnown RBP16.84■□□□□ 0.29
COL15A1-201ENST00000375001 UNC13CQ8NB66 2214 aa16.84■□□□□ 0.29
COL15A1-201ENST00000375001 IZUMO1RA6ND01 250 aa16.84■□□□□ 0.29
COL15A1-201ENST00000375001 OR4X2Q8NGF9 303 aa16.84■□□□□ 0.29
COL15A1-201ENST00000375001 TRAV30A0A087WSZ9 112 aa16.84■□□□□ 0.29
COL15A1-201ENST00000375001 CTSBP07858 339 aa16.84■□□□□ 0.29
COL15A1-201ENST00000375001 NBEAP1P0C6P0 100 aa16.84■□□□□ 0.29
COL15A1-201ENST00000375001 TRBV7-9A0A0J9YWB2 115 aa16.83■□□□□ 0.29
COL15A1-201ENST00000375001 FAM181BA6NEQ2 426 aa16.83■□□□□ 0.29
COL15A1-201ENST00000375001 PEX7O00628 323 aa16.83■□□□□ 0.29
COL15A1-201ENST00000375001 FOXC1Q12948 553 aa16.83■□□□□ 0.29
COL15A1-201ENST00000375001 FHL5Q5TD97 284 aa16.83■□□□□ 0.29
COL15A1-201ENST00000375001 ITLN1Q8WWA0 313 aa16.83■□□□□ 0.29
COL15A1-201ENST00000375001 RPP21Q9H633 154 aaKnown RBP16.83■□□□□ 0.29
COL15A1-201ENST00000375001 MYO16Q9Y6X6 1858 aa16.83■□□□□ 0.29
COL15A1-201ENST00000375001 COL11A1P12107 1806 aaPredicted RBP16.83■□□□□ 0.29
COL15A1-201ENST00000375001 CEACAM1P13688 526 aa16.83■□□□□ 0.29
COL15A1-201ENST00000375001 GFI1BQ5VTD9 330 aa16.83■□□□□ 0.29
COL15A1-201ENST00000375001 PCSK4Q6UW60 755 aa16.83■□□□□ 0.29
COL15A1-201ENST00000375001 LOC390937A0A1W2PQ73 354 aa16.83■□□□□ 0.28
COL15A1-201ENST00000375001 IDI2-AS1Q9NZ38 188 aa16.83■□□□□ 0.28
COL15A1-201ENST00000375001 CACNA1DQ01668 2161 aa16.83■□□□□ 0.28
COL15A1-201ENST00000375001 TRAV9-1A0A075B6T8 112 aa16.83■□□□□ 0.28
COL15A1-201ENST00000375001 SLC22A18ASQ8N1D0 253 aa16.83■□□□□ 0.28
COL15A1-201ENST00000375001 TRAV8-4A0A0B4J246 113 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 IGHV5-10-1A0A0J9YXX1 117 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 ZNF146Q15072 292 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 ZNF585BQ52M93 769 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 RIPPLY2Q5TAB7 128 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 FAM159AQ6UWV7 190 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 QSER1Q2KHR3 1735 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 HIGD1CA8MV81 97 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 NAA38Q9BRA0 125 aaKnown RBP16.82■□□□□ 0.28
COL15A1-201ENST00000375001 IGHV3OR16-13A0A075B7E8 117 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 IGHV3-74A0A0B4J1X5 117 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 A0A0G2JK05 382 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 C1QTNF9P0C862 333 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 PSMG4Q5JS54 123 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 TIMP4Q99727 224 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.82■□□□□ 0.28
COL15A1-201ENST00000375001 ASPHD2Q6ICH7 369 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 GLRX5Q86SX6 157 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms