RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 C11orf94C9JXX5 98 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 PRSS46E5RG02 174 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 FNDC10F2Z333 226 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 GALR1P47211 349 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 TNFAIP6P98066 277 aaPredicted RBP11.49□□□□□ -0.57
HMGCL-203ENST00000374490 POU2AF1Q16633 256 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 C17orf58Q2M2W7 97 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 HIST3H2BBQ8N257 126 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 ZNRF1Q8ND25 227 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 LINC00574Q9H8X3 128 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 CHODLQ9H9P2 273 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 MIOXQ9UGB7 285 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 PITPNC1Q9UKF7 332 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 DOPEY2Q9Y3R5 2298 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 HMGB3O15347 200 aaKnown RBP11.49□□□□□ -0.57
HMGCL-203ENST00000374490 TMPRSS2O15393 492 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 CXorf1O96002 111 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 CEACAM8P31997 349 aaPredicted RBP11.49□□□□□ -0.57
HMGCL-203ENST00000374490 ATP5IP56385 69 aaPredicted RBP11.49□□□□□ -0.57
HMGCL-203ENST00000374490 LINC00205P59089 165 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 RPS16P62249 146 aaKnown RBP11.49□□□□□ -0.57
HMGCL-203ENST00000374490 HNF4GQ14541 408 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 STUMQ69YW2 141 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 KCNIP4Q6PIL6 250 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 TREML4Q6UXN2 200 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 SPNS3Q6ZMD2 512 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 SSX9Q7RTT3 188 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 OR51G1Q8NGK1 321 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 FRZBQ92765 325 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 CORO2AQ92828 525 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 IDI2-AS1Q9NZ38 188 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 PRNDQ9UKY0 176 aa11.49□□□□□ -0.57
HMGCL-203ENST00000374490 INTS1Q8N201 2190 aaKnown RBP11.48□□□□□ -0.57
HMGCL-203ENST00000374490 IFITM10A6NMD0 228 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 PPP5D1E7EU14 171 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 PHOX2AO14813 284 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 IRF2P14316 349 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 GNLYP22749 145 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 UQCRFS1P47985 274 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 ZNF134P52741 427 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 FAM3BP58499 235 aaPredicted RBP11.48□□□□□ -0.57
HMGCL-203ENST00000374490 HSPE1P61604 102 aaKnown RBP11.48□□□□□ -0.57
HMGCL-203ENST00000374490 RBPJQ06330 500 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 RAB31Q13636 194 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 RPRMLQ8N4K4 120 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 ABHD5Q8WTS1 349 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 SSX3Q99909 188 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 TMEM204Q9BSN7 226 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 GGTLC1Q9BX51 225 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 NPVFQ9HCQ7 196 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 DMRT1Q9Y5R6 373 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 PXMP4Q9Y6I8 212 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 COL12A1Q99715 3063 aa11.48□□□□□ -0.57
HMGCL-203ENST00000374490 RRHO14718 337 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 GGCTO75223 188 aaKnown RBP11.47□□□□□ -0.57
HMGCL-203ENST00000374490 MT-CO2P00403 227 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 TYMSP04818 313 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 NPY1RP25929 384 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 MRPS11P82912 194 aaKnown RBP11.47□□□□□ -0.57
HMGCL-203ENST00000374490 CT45A1Q5HYN5 189 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 VHLLQ6RSH7 139 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 SSX8Q7RTT4 187 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 ZNF439Q8NDP4 499 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 SLC24A4Q8NFF2 622 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 NUP37Q8NFH4 326 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 CT45A3Q8NHU0 189 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 GATAD1Q8WUU5 269 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 SNRNP40Q96DI7 357 aaKnown RBP11.47□□□□□ -0.57
HMGCL-203ENST00000374490 IMMP2LQ96T52 175 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 MS4A5Q9H3V2 200 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 TMEM14BQ9NUH8 114 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 RELNP78509 3460 aa11.47□□□□□ -0.57
HMGCL-203ENST00000374490 SAA2-SAA4A0A096LPE2 208 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 NKX6-3A6NJ46 265 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 SLC31A2O15432 143 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 IGHV1-46P01743 117 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 STAG3L2P0CL84 134 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 STAG3L3P0CL85 134 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 SAA2P0DJI9 122 aaPredicted RBP11.46□□□□□ -0.57
HMGCL-203ENST00000374490 LCN2P80188 198 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 ALKBH2Q6NS38 261 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 ZNF788Q6ZQV5 615 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 PLPPR2Q96GM1 343 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 RHOVQ96L33 236 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 GAFA1Q96PS6 74 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 MGST2Q99735 147 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 GCM1Q9NP62 436 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 ZNF257Q9Y2Q1 563 aa11.46□□□□□ -0.57
HMGCL-203ENST00000374490 LSM4Q9Y4Z0 139 aaKnown RBP11.46□□□□□ -0.57
HMGCL-203ENST00000374490 LINC00587B1AMM8 73 aa11.46□□□□□ -0.58
HMGCL-203ENST00000374490 TEX36Q5VZQ5 186 aa11.46□□□□□ -0.58
HMGCL-203ENST00000374490 OR2T10Q8NGZ9 312 aa11.46□□□□□ -0.58
HMGCL-203ENST00000374490 OR4X1Q8NH49 305 aa11.46□□□□□ -0.58
HMGCL-203ENST00000374490 ACY3Q96HD9 319 aa11.46□□□□□ -0.58
HMGCL-203ENST00000374490 PFDN5Q99471 154 aa11.46□□□□□ -0.58
HMGCL-203ENST00000374490 LRRK2Q5S007 2527 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 NBASA2RRP1 2371 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 TRAV3A0A0B4J244 114 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 TRAV38-1A0A0B4J264 116 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 hADV38S2A0JD32 116 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms