RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 SNAPINO95295 136 aa11.75□□□□□ -0.53
SMPDL3B-201ENST00000373888 HKR1P10072 659 aa11.75□□□□□ -0.53
SMPDL3B-201ENST00000373888 RPL12P30050 165 aaKnown RBP11.75□□□□□ -0.53
SMPDL3B-201ENST00000373888 SRP14P37108 136 aaKnown RBP11.75□□□□□ -0.53
SMPDL3B-201ENST00000373888 NKX2-1P43699 371 aaPredicted RBP11.75□□□□□ -0.53
SMPDL3B-201ENST00000373888 EBI3Q14213 229 aa11.75□□□□□ -0.53
SMPDL3B-201ENST00000373888 TUSC1Q2TAM9 212 aa11.75□□□□□ -0.53
SMPDL3B-201ENST00000373888 EIF5AL1Q6IS14 154 aaKnown RBP11.75□□□□□ -0.53
SMPDL3B-201ENST00000373888 THNSL2Q86YJ6 484 aa11.75□□□□□ -0.53
SMPDL3B-201ENST00000373888 OSR1Q8TAX0 266 aaPredicted RBP11.75□□□□□ -0.53
SMPDL3B-201ENST00000373888 A0A1B0GU03 582 aa11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 IGKV1D-33P01593 117 aa11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 IGKV1-33P01594 117 aa11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 SNRNP70P08621 437 aaKnown RBP11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 NQO2P16083 231 aa11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 DEFB112Q30KQ8 113 aa11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 FOXRED2Q8IWF2 684 aa11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 BAP18Q8IXM2 172 aa11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 C22orf15Q8WYQ4 148 aa11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 RBMXL1Q96E39 390 aaKnown RBP11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 RNF5Q99942 180 aa11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 PRDM13Q9H4Q3 707 aa11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 CBY1Q9Y3M2 126 aa11.74□□□□□ -0.53
SMPDL3B-201ENST00000373888 GPR137BO60478 399 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 MOSP00540 346 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 HRASP01112 189 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 NMBP08949 121 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 FAM106CPP0CH98 169 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 POU2AF1Q16633 256 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 LRRC75BQ2VPJ9 315 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 OR2T10Q8NGZ9 312 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 RNASE11Q8TAA1 199 aaKnown RBP11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 PIFOQ8TCI5 191 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 R3HDM4Q96D70 268 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 EAF1Q96JC9 268 aaPredicted RBP11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 HARBI1Q96MB7 349 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 GSX1Q9H4S2 264 aaPredicted RBP11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 CDC42EP3Q9UKI2 254 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 NAV3Q8IVL0 2385 aa11.73□□□□□ -0.53
SMPDL3B-201ENST00000373888 SONP18583 2426 aaKnown RBP11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 MDFIC2A0A1B0GVS7 189 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 MSGN1A6NI15 193 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 MARCH11A6NNE9 402 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 SRRM4A7MD48 611 aaKnown RBP11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 JTBO76095 146 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 IGKV1-5P01602 117 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 P0C879 139 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 CD24P25063 80 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 LGALS7P47929 136 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 RPS16P62249 146 aaKnown RBP11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 FAM219AQ8IW50 185 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 Q8N6K4 173 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 RITA1Q96K30 269 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 SSX3Q99909 188 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 CYTL1Q9NRR1 136 aa11.72□□□□□ -0.53
SMPDL3B-201ENST00000373888 HIVEP2P31629 2446 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 CLN5O75503 358 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 KRASP01116 189 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 IGLV2-23P01705 113 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 G6PCP35575 357 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 AKR1C2P52895 323 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 ERVK-16P61578 105 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 VAMP2P63027 116 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 ID3Q02535 119 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 SCGB2A2Q13296 93 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 HES1Q14469 280 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 FBLN7Q53RD9 439 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 COMMD7Q86VX2 200 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 RHOVQ96L33 236 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 ZNF48Q96MX3 618 aaPredicted RBP11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 SLC25A31Q9H0C2 315 aa11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 RCL1Q9Y2P8 373 aaKnown RBP11.71□□□□□ -0.53
SMPDL3B-201ENST00000373888 MXRA5Q9NR99 2828 aa11.71□□□□□ -0.54
SMPDL3B-201ENST00000373888 WRBO00258 174 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 TMEM11P17152 192 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 C16orf54Q6UWD8 224 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 Q6YL49 198 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 VKORC1L1Q8N0U8 176 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 CITED4Q96RK1 184 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 TSNAXQ99598 290 aaKnown RBP11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 COA4Q9NYJ1 87 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 MMP24Q9Y5R2 645 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 BORCS7-ASMTA0A0B4J1R7 106 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 A0A0G2JRQ6 117 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 FAM90A26D6RGX4 464 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 H3BUX3 64 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 PITX3O75364 302 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 IL6RP08887 468 aaPredicted RBP11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 SAA1P0DJI8 122 aaPredicted RBP11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 IER3P46695 156 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 UBE2KP61086 200 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 HNF4GQ14541 408 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 OR4A47Q6IF82 309 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 SSX9Q7RTT3 188 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 PUSL1Q8N0Z8 303 aaKnown RBP11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 OR2C3Q8N628 320 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 DMBX1Q8NFW5 382 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 NPBQ8NG41 125 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 ZDHHC16Q969W1 377 aa11.7□□□□□ -0.54
SMPDL3B-201ENST00000373888 RAB40CQ96S21 281 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms