RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 ZNF66Q6ZN08 573 aa9.72□□□□□ -0.85
TRAPPC3-201ENST00000373159 PRSS48Q7RTY5 328 aa9.72□□□□□ -0.85
TRAPPC3-201ENST00000373159 KIR2DL5AQ8N109 375 aa9.72□□□□□ -0.85
TRAPPC3-201ENST00000373159 OR4A5Q8NH83 315 aa9.72□□□□□ -0.85
TRAPPC3-201ENST00000373159 KIR2DL5BQ8NHK3 375 aa9.72□□□□□ -0.85
TRAPPC3-201ENST00000373159 SPAG8Q99932 426 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC3-201ENST00000373159 SPATA2Q9UM82 520 aa9.72□□□□□ -0.85
TRAPPC3-201ENST00000373159 UFC1Q9Y3C8 167 aa9.72□□□□□ -0.85
TRAPPC3-201ENST00000373159 MFSD2BA6NFX1 497 aa9.71□□□□□ -0.86
TRAPPC3-201ENST00000373159 CGB1A6NKQ9 187 aa9.71□□□□□ -0.86
TRAPPC3-201ENST00000373159 MYOD1P15172 320 aa9.71□□□□□ -0.86
TRAPPC3-201ENST00000373159 RAB3BP20337 219 aa9.71□□□□□ -0.86
TRAPPC3-201ENST00000373159 CRHBPP24387 322 aa9.71□□□□□ -0.86
TRAPPC3-201ENST00000373159 PTBP1P26599 531 aaKnown RBP eCLIP9.71□□□□□ -0.86
TRAPPC3-201ENST00000373159 ZNF502Q8TBZ5 544 aa9.71□□□□□ -0.86
TRAPPC3-201ENST00000373159 RNF183Q96D59 192 aa9.71□□□□□ -0.86
TRAPPC3-201ENST00000373159 AIFM2Q9BRQ8 373 aa9.71□□□□□ -0.86
TRAPPC3-201ENST00000373159 ZNF436Q9C0F3 470 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC3-201ENST00000373159 CCDC90BQ9GZT6 254 aa9.71□□□□□ -0.86
TRAPPC3-201ENST00000373159 BET1LQ9NYM9 111 aa9.71□□□□□ -0.86
TRAPPC3-201ENST00000373159 TRDV1A0A1B0GX56 115 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 TSPAN4O14817 238 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 REG1AP05451 166 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 MYL9P24844 172 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 OR2B8PP59922 312 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 MSMO1Q15800 293 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 DEFB135Q30KP9 77 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 PLET1Q6UQ28 207 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 SSX9Q7RTT3 188 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 NR2C2APQ86WQ0 139 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 RPP25LQ8N5L8 163 aaKnown RBP9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 TMEM217Q8N7C4 229 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 STPG3Q8N7X2 389 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 SRSF8Q9BRL6 282 aaKnown RBP9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 TAS2R8Q9NYW2 309 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 ANXA10Q9UJ72 324 aa9.7□□□□□ -0.86
TRAPPC3-201ENST00000373159 IGLC7A0M8Q6 106 aa9.69□□□□□ -0.86
TRAPPC3-201ENST00000373159 RBFOX2O43251 390 aaKnown RBP eCLIP9.69□□□□□ -0.86
TRAPPC3-201ENST00000373159 GPR183P32249 361 aa9.69□□□□□ -0.86
TRAPPC3-201ENST00000373159 TIMM50Q3ZCQ8 353 aa9.69□□□□□ -0.86
TRAPPC3-201ENST00000373159 LGALS9CQ6DKI2 356 aa9.69□□□□□ -0.86
TRAPPC3-201ENST00000373159 LAMTOR1Q6IAA8 161 aa9.69□□□□□ -0.86
TRAPPC3-201ENST00000373159 ZBTB34Q8NCN2 500 aa9.69□□□□□ -0.86
TRAPPC3-201ENST00000373159 VN1R17PQ8TDU5 208 aa9.69□□□□□ -0.86
TRAPPC3-201ENST00000373159 THYN1Q9P016 225 aa9.69□□□□□ -0.86
TRAPPC3-201ENST00000373159 VPS13DQ5THJ4 4388 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 IGHV3-35A0A0C4DH35 117 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 SSX5O60225 188 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 FGF2P09038 288 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 TBCEQ15813 527 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 POU2AF1Q16633 256 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 ODF3L2Q3SX64 289 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 ZNF367Q7RTV3 350 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 SPAG16Q8N0X2 631 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 NUDCD2Q8WVJ2 157 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 TMEM190Q8WZ59 177 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 GPHA2Q96T91 129 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 HRASLSQ9HDD0 168 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 CCL28Q9NRJ3 127 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 NDUFB11Q9NX14 153 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 UBQLN2Q9UHD9 624 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 PCLOQ9Y6V0 5065 aa9.68□□□□□ -0.86
TRAPPC3-201ENST00000373159 TMEM235A6NFC5 223 aa9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 UPK2O00526 184 aa9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 TGOLN2O43493 480 aa9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 SCGNO76038 276 aa9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 AQP4P55087 323 aa9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 TAS2R31P59538 309 aa9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 GNG2P59768 71 aa9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 PHLDA1Q8WV24 401 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 GALNT14Q96FL9 552 aa9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 ATP6V0BQ99437 205 aa9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 COMMD5Q9GZQ3 224 aa9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 MAP6D1Q9H9H5 199 aa9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 DAZ1Q9NQZ3 744 aaKnown RBP9.67□□□□□ -0.86
TRAPPC3-201ENST00000373159 TRAV3A0A0B4J244 114 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 OR4C46A6NHA9 309 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 NOTOA8MTQ0 251 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 K7EMT4 169 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 NDUFA4O00483 81 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 CYB5BO43169 146 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 TNFSF12O43508 249 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 HPRT1P00492 218 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 NQO2P16083 231 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 FCGR2CP31995 323 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 C22orf42Q6IC83 251 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 SPSB3Q6PJ21 355 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 ZNF773Q6PK81 442 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 SECTM1Q8WVN6 248 aa9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 BSCL2Q96G97 398 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 QTRT1Q9BXR0 403 aaKnown RBP9.66□□□□□ -0.86
TRAPPC3-201ENST00000373159 HECTD4Q9Y4D8 3996 aa9.65□□□□□ -0.86
TRAPPC3-201ENST00000373159 KIAA1109Q2LD37 5005 aa9.65□□□□□ -0.86
TRAPPC3-201ENST00000373159 OR2T8A6NH00 312 aa9.65□□□□□ -0.86
TRAPPC3-201ENST00000373159 DEDDO75618 318 aa9.65□□□□□ -0.86
TRAPPC3-201ENST00000373159 SERPINE2P07093 398 aa9.65□□□□□ -0.86
TRAPPC3-201ENST00000373159 RPA2P15927 270 aa9.65□□□□□ -0.86
TRAPPC3-201ENST00000373159 RPL35AP18077 110 aaKnown RBP9.65□□□□□ -0.86
TRAPPC3-201ENST00000373159 THOC7Q6I9Y2 204 aaKnown RBP9.65□□□□□ -0.86
TRAPPC3-201ENST00000373159 HSD17B13Q7Z5P4 300 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms