RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 ADAP1O75689 374 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 SNRNP70P08621 437 aaKnown RBP11.83□□□□□ -0.52
RPF1-202ENST00000370656 TMEM11P17152 192 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 EIF2B2P49770 351 aaKnown RBP11.83□□□□□ -0.52
RPF1-202ENST00000370656 ZNF137PP52743 207 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 BRWD1-AS2P59051 145 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 ZNF585BQ52M93 769 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 TEX38Q6PEX7 206 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 GSG1LQ6UXU4 331 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 C5orf56Q8N8D9 126 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 OR9G1Q8NH87 305 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 RAX2Q96IS3 184 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 C2orf50Q96LR7 162 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 DUX3Q96PT4 197 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 GON7Q9BXV9 100 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 LIN7CQ9NUP9 197 aaKnown RBP11.83□□□□□ -0.52
RPF1-202ENST00000370656 RNF150Q9ULK6 438 aa11.83□□□□□ -0.52
RPF1-202ENST00000370656 FAM90A9PA6NNJ1 464 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 HMSDA8MTL9 139 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 RAB29O14966 203 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 SLC31A2O15432 143 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 SLC25A6P12236 298 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 DUTP33316 252 aaKnown RBP11.82□□□□□ -0.52
RPF1-202ENST00000370656 FGL1Q08830 312 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 Q5BKY6 102 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 GGNBP1Q5YKI7 109 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 STPG2Q8N412 459 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 OR11H4Q8NGC9 324 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 RBPMSQ93062 196 aaKnown RBP11.82□□□□□ -0.52
RPF1-202ENST00000370656 ABHD14BQ96IU4 210 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 OR10C1Q96KK4 312 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 PRR13Q9NZ81 148 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 LINC00527Q9UJ94 153 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 SORL1Q92673 2214 aa11.82□□□□□ -0.52
RPF1-202ENST00000370656 SEC14L6B5MCN3 397 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 CCSO14618 274 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 RBFOX2O43251 390 aaKnown RBP eCLIP11.81□□□□□ -0.52
RPF1-202ENST00000370656 IFNA21P01568 189 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 IGKV1-39P01597 117 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 IGHG2P01859 326 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 IGKV1D-39P04432 117 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 SLC25A4P12235 298 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 VDAC1P21796 283 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 NFYBP25208 207 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 GPR12P47775 334 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 RPL30P62888 115 aaKnown RBP11.81□□□□□ -0.52
RPF1-202ENST00000370656 CATR1Q13166 79 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 LTC4SQ16873 150 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 NMSQ5H8A3 153 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 FAM71F2Q6NXP2 309 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 TMEM65Q6PI78 240 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 LYZL2Q7Z4W2 148 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 CD300LFQ8TDQ1 290 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 DDB2Q92466 427 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 LSM10Q969L4 123 aaKnown RBP11.81□□□□□ -0.52
RPF1-202ENST00000370656 GPHA2Q96T91 129 aa11.81□□□□□ -0.52
RPF1-202ENST00000370656 GAR1Q9NY12 217 aaKnown RBP11.81□□□□□ -0.52
RPF1-202ENST00000370656 ZNF256Q9Y2P7 627 aaPredicted RBP11.81□□□□□ -0.52
RPF1-202ENST00000370656 BIRC6Q9NR09 4857 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 SACSQ9NZJ4 4579 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 TRAV14DV4A0A0A6YYC5 116 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 LINC00473A8K010 186 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 MPTX1A8MV57 137 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 SMLR1H3BR10 107 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 J3QR06 171 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 AP4M1O00189 453 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 TNFSF12O43508 249 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 HOXB5P09067 269 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 P0C879 139 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 LYL1P12980 280 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 HNF4GQ14541 408 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 CXorf66Q5JRM2 361 aaPredicted RBP11.8□□□□□ -0.52
RPF1-202ENST00000370656 TMEM268Q5VZI3 342 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 LAMTOR1Q6IAA8 161 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 LCNL1Q6ZST4 164 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 ZNF833PQ6ZTB9 187 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 OR8H3Q8N146 312 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 SLC35G3Q8N808 338 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 ST6GALNAC6Q969X2 333 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 SEC22AQ96IW7 307 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 ADTRPQ96IZ2 230 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 SMAD5-AS1Q9Y6J3 95 aa11.8□□□□□ -0.52
RPF1-202ENST00000370656 C5orf51A6NDU8 294 aa11.79□□□□□ -0.52
RPF1-202ENST00000370656 SERPINE2P07093 398 aa11.79□□□□□ -0.52
RPF1-202ENST00000370656 PSMB6P28072 239 aa11.79□□□□□ -0.52
RPF1-202ENST00000370656 KIR2DS2P43631 304 aa11.79□□□□□ -0.52
RPF1-202ENST00000370656 CDX1P47902 265 aaPredicted RBP11.79□□□□□ -0.52
RPF1-202ENST00000370656 ZBTB8BQ8NAP8 495 aaPredicted RBP11.79□□□□□ -0.52
RPF1-202ENST00000370656 OR51H1Q8NH63 302 aa11.79□□□□□ -0.52
RPF1-202ENST00000370656 PPP1R1CQ8WVI7 109 aa11.79□□□□□ -0.52
RPF1-202ENST00000370656 LEAP2Q969E1 77 aa11.79□□□□□ -0.52
RPF1-202ENST00000370656 RCHY1Q96PM5 261 aa11.79□□□□□ -0.52
RPF1-202ENST00000370656 SAA2-SAA4A0A096LPE2 208 aa11.78□□□□□ -0.52
RPF1-202ENST00000370656 C13orf42A0A1B0GVH6 325 aa11.78□□□□□ -0.52
RPF1-202ENST00000370656 A0A1W2PPI3 338 aa11.78□□□□□ -0.52
RPF1-202ENST00000370656 PITX3O75364 302 aa11.78□□□□□ -0.52
RPF1-202ENST00000370656 MPC2O95563 127 aa11.78□□□□□ -0.52
RPF1-202ENST00000370656 LY86O95711 162 aa11.78□□□□□ -0.52
RPF1-202ENST00000370656 IGKV1D-33P01593 117 aa11.78□□□□□ -0.52
RPF1-202ENST00000370656 IGKV1-33P01594 117 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms